Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1972 ATGCTCATGGATTCTCCTGATGTTACCAACAAAACACCCATTTCCATCGCCACTTCCGATCCTGCTGCTGCTTCTTCTTCTTCTGATTCTCCTCCTGTTCAAGAATCCCCGTTTTTCAGCTTTATAAACAATTTATCCCCAATAAAGTCTGTCAAGGCTTCTCGTGTTGCTCAAGATTTCCTAGGACTGAATTCTCCCCCTGTCGTCTTCACGTCACCGCGTATTAATATCCAACGTGGATCCAAGTTCTTGGAGAGGCCTCCTTGCTCTCAATCAGCCATTGTACAAATTTCTCAAAGTGTCAATGGAGTCAAGAGCCTTGTTGATAACCCTGTTGATTCTGACAAATCTGCTTCTTTATCGCCGGGATTCATAACTCATAGCAAAAATTATTCAAATAGTCAACACTGCGGCTCTTCACCGTGTGTAGAATCTGTAGATGAATACTTAGCTGATCCTTCAGATATTGATCATGCATCTTTGGGGCATTCAGTCAACCCCGATGTGAAACAATACAATGAGAACGCTGGATCTTCACTAAACGACTTAACTCACTCAAAAAAAGCTGTATCAAAATTTGATGTTAAAAATGGTCCCGATGACAAGATGAACAGACCTTTGCTTTTGTTAGAGGAGTCTGAATCCAGCTATCCAGAAAAGCCAGGACTAGTTGATGAAGCAGGAAAAGTAGAAGGGGAGAAAGCTGTTGAATTGGCTTCCCAAGAATGTGCAAAGTTAGAGACTGTTTTGTCTGCTGACCATGTTTTTCAGAAGCAGCGTTCTGATGAATCAACTGTCCAGTGCGCTGGAAATGAAATGCAGGATCATTGTGATTTTGCCTCTCAGTCAATGCTTGAGCCTTTGCTGGATGTAGAAGAATGTGAAAATGGTGGCAAGATGGGGACAACCTCTCATGTTGTGCAAAATATATCACAAGACAGCACCAAGGCCAGGCAAAAGCACCGAGGCCTGCTTAGACGCTGCCTTCAGTTCGAGGAGGCTGCATCAACTGCTTTTGGAAATTTGAACAGCTGCCCACTTCAAGCTCATGTTCCTGTAGACTTAATGCCATCAGCTAACTCCGCAGAGTCAAAAGATTTAGAAACTTCTCATGTTGCACCAAATGACACTTCAGGTGAGGAGAAAATGATCAGGCAGTCCAAACCTATCACCACCACATTTTCTCCACAGTGTAGTGGAAGCTTCCCGGTGAAAGGTTCCAAACCATCTGGTATTGGGTTGCACTTAAATAGCATTGTAAATGCTATGCCCCATGGCCGTGCTGCATTTACCGGTATGAGACTAGCAGAGGGCTGTACAGGTTCACATGGCGAGAAGTCTGTTACTTTACTAAGCTGCCAGAATGCTGAGGACTTAAAGAGGGGCTTAATTTCATTAAACATGGATGAGAAAATATCAGTTGGCAATAAATGTGAGAGGCACGAAAGGGATGCTTCAATATCTGCAGATTCTCTCCCCCCTGGGTCTCCAAGCTCTATAGAACCTACCAATTTGTCGATACATGTTGAGCATCCAGCAAATTTCCAAGATGAGAGAAAATTAAGCTCTGTAGGTGATGGAAAGTTTGAGGATTCCAATCAAACAAGCCCCAAAAAGAAAAAGAAGAAAACATCAAACCCCTCTGATGACGACGGTTGTAAAAGGTGCAACTGTAAAAAGAGTAAATGTTTAAAACTTTACTGTGATTGTTTTGCTGCCGGATTATTTTGTGCTGAGTCTTGTGCATGTCAAGACTGCTTCAATAGACCAGAACATGGAAATTTGGTTCTAGAGACAAGGCAGCAAATAGAATCCCGCAACCCACTTGCATTTGCCCCCAAGATTGTGCAGCATGTGACTGACTTTCCTCCAAATAATATGGACGACACCAATATAACGACACCATCATCTGCAAGACATAAAAGAGGGTGCAACTGCAAAAAGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTTGGATGCTCCAGTGGATGTCGATGTGAGGGATGTAAGAATGTCTTTGGCAGGAAAGAAGAATACGTTACCATTGAACATGCTTTGAGTGAAGAAAGGAGAAACAGAGCAGAGGAAGGATCAAACAGTACCCTTCACAGAGAGCTGGAAACGGAAGCAAAGAAGACGGATATGTCACATGGAGAGTTGTATGATTTGCACTGCCTCTCTCCAATAACACCGTCTTTGGAATACTCAGACCAAGGAAAGCAAGCTGCAAATTTACGAGTTCCTGGGAAATATATTCCAGCCACAGAGATAAGAAACGCCTCTTGTGAATGGCAACAAGATAGCAACATGGAAACAATGGATCAGTCATCACCAAGATGTGATTCAGTTGCCAAAGTAGGGCAGCTGGCTATTTCAAATTCCCAGTCAATGTCCAATGCTTCATCCTCAGCTAAAACAAGGGATCAGACGCATATTCCGCGTATTCTATCTGGCGGGTCCCTTCGGTGGCGTAGTTCACCAATCACCCCAATGACTAAATTAGGTGAAACTAAATCTCTAAAGTGTCTTGAATCGAATAGCAGACTTTTTGACATTCTAGAAGATGAAACTCCTGAGATGTTGAAGGAAGCTTCAACTCCCATTAAGTCTGTGAAAACAAGTTCCCCTAAGCAGAAGCGAGTTTCTCCTCCTCACAGTCATCTACGTGGACTTGGTTCAAGCTCTTCAGGAGGGTTGAGAAGTGGCAGGAAATTTATATTGAAAGCTGTACCTTCTTTCCCACCACTGACCCCATGTATTACTTCGAAAGCTAATGGTCATGAAAATTCAGAGAATTGCAAGCAAGTGACGGACGCCCCAAATGCTGAAAAGATCTCTCAATGA 2859 0.4295 MLMDSPDVTNKTPISIATSDPAAASSSSDSPPVQESPFFSFINNLSPIKSVKASRVAQDFLGLNSPPVVFTSPRINIQRGSKFLERPPCSQSAIVQISQSVNGVKSLVDNPVDSDKSASLSPGFITHSKNYSNSQHCGSSPCVESVDEYLADPSDIDHASLGHSVNPDVKQYNENAGSSLNDLTHSKKAVSKFDVKNGPDDKMNRPLLLLEESESSYPEKPGLVDEAGKVEGEKAVELASQECAKLETVLSADHVFQKQRSDESTVQCAGNEMQDHCDFASQSMLEPLLDVEECENGGKMGTTSHVVQNISQDSTKARQKHRGLLRRCLQFEEAASTAFGNLNSCPLQAHVPVDLMPSANSAESKDLETSHVAPNDTSGEEKMIRQSKPITTTFSPQCSGSFPVKGSKPSGIGLHLNSIVNAMPHGRAAFTGMRLAEGCTGSHGEKSVTLLSCQNAEDLKRGLISLNMDEKISVGNKCERHERDASISADSLPPGSPSSIEPTNLSIHVEHPANFQDERKLSSVGDGKFEDSNQTSPKKKKKKTSNPSDDDGCKRCNCKKSKCLKLYCDCFAAGLFCAESCACQDCFNRPEHGNLVLETRQQIESRNPLAFAPKIVQHVTDFPPNNMDDTNITTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVFGRKEEYVTIEHALSEERRNRAEEGSNSTLHRELETEAKKTDMSHGELYDLHCLSPITPSLEYSDQGKQAANLRVPGKYIPATEIRNASCEWQQDSNMETMDQSSPRCDSVAKVGQLAISNSQSMSNASSSAKTRDQTHIPRILSGGSLRWRSSPITPMTKLGETKSLKCLESNSRLFDILEDETPEMLKEASTPIKSVKTSSPKQKRVSPPHSHLRGLGSSSSGGLRSGRKFILKAVPSFPPLTPCITSKANGHENSENCKQVTDAPNAEKISQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1972 952 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 928 IPR044522 GO:0003700
Mibi08g1972 952 MobiDBLite consensus disorder prediction 362 376 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 921 952 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 8 34 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 872 886 - -
Mibi08g1972 952 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 642 676 IPR005172 -
Mibi08g1972 952 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 554 589 IPR005172 -
Mibi08g1972 952 SMART CXC_2 551 592 IPR033467 -
Mibi08g1972 952 SMART CXC_2 639 680 IPR033467 -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 865 905 - -
Mibi08g1972 952 ProSiteProfiles CRC domain profile. 552 679 IPR005172 -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 360 384 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 483 503 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 1 34 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 923 952 - -
Mibi08g1972 952 MobiDBLite consensus disorder prediction 516 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1972 Mibi-ChrMibi08 36690208 36695197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1972 531 682 CPP Transcription Factor Family AT3G22760 63.399 2.77e-60 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mibi08g1972 TCR 2.4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1972 08 36690208 36695197 Mibi08g1972 08 36690208 36695197 ECH