Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1969 ATGACGAAGAAGAAGAATCCCCTGGTTTTTATGGATGTTTCTATAGATGGAGACCCTGTTGAAAGGATGGTTTTTGAGCTATTCTATGATATTGCTCCCAAGACTGCAGAAAATTTCCGTGCATTATGTACAGGAGAAAAGGGAGTTGGTCCACGAACAGGGAAGCCACTACACTACAAGGGCTCCTTCTTTCATCGCATTTTGAAAGGCTCCATTGCGGAGGGAGGTGATTTTGTCAATCGAAACGGGACTGGTGGAGAAAGCATATATGGCTCTAATTTCCCAGACGAGTCTCCTAAGCTTAAGCATGATGCACCTGGTCTTCTGTCTATGGCAATTGCTAGTCGTGATTCTCATGGTTCTCTCTTTATGATCACATTGAAAGCTGATCACCATCTTGATAGGAAGCATGTGGTCTTTGGAAAGCTTGTTCAAGGACTTGATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGATGGGCATCCATCTGTGACTGTTAAAATCATCCATTGTGGTGAATATAATGAAGATGGAAAGAAGATGAATAAATTGACTTCTGAAACCAATAATCATGAGGCACGGCGGAAGGGGAAGCACAAAAAGGCTTCAAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCATCTGAATCAGATAGTGATTCAGATTCAGACTACGAATCATCAGAATCTGATAGTGATTCTGACTCAGATCTGTCATCATCATCATCTGACATAAGTTCTTCCAGTGATGACAGGCGGAAAAAGAGGAAAAGATCTTCTAGGAAAGACAAACATAAACGCAGAAAAAGAAGGGATAGGCGTCGTGACAAGAGGCGGCGAAGAAAAGAGAAAAGATCAAAGCGCAGATCTAGAAGGGATTCGGAGAGTGCTACTGATTCTGATAGTGAAAGCAAAAGTGACAGCAGCTCTGGTGGTGAAAGTCTTGATGCTCCAGGAAAAGAGAAGAAATGCAGAGATTATACTCTGAAAGAAGCTGAAGTTCAATCTCCTTTAGCTGGGGATAGAGAAATGCATTCCATGCATTATAAAAGGAGGGGAGAAGCGGACACACCGGAGAATGAGGAAGCATCCCCCAAAGAAAATGGAGAACGACATAGCAATGGTATTGGAGCTGACTTTAGATCTGATAGAAGTGAGGAGAGGCAGCCTGATGTGATGGATGATAATCCTGGCAAATCTAGGAGTCGAAGTATAAGTCCCAAGAGGGCCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGCAAGAGCCCAAGTGCTAGTCCAGAAAGGAAGATCAGCAGAAGCCCTAGTGGCAGTAGAAGCCCTCGATCTCCACCTAGGAGGAGTTTCAGCAGAAGTCCTGCCAGGAGCATTGGTAGAAGCCCAAGCAGAAGCATCAGCAGGAGCCCAGTGAGGGGTTCAAAGGGAAGATATGTCAGTAGGAGTCCTGTGAGAACCCGCTCACGGAGAAGTGTCAGTGAGAGTCCTGAGAGATCCCCATCCCTTAGCCACCGGAGCAGGAGTTCAGCCAGAATATCATCAAGAAGATCTGTCAGTAGAAGCCCTGTAAGAATTTCAAGGAGGAGTATAAGTAGGAGTCCAGTTAGATCTTCTGCAAGGAGCTTGAGCAGAAGCTCTGGCAGGGTCCCATCAAGGAGAGGTGTCAGCCGAAGTCCTGTGAGGTCACCTAGCCGAGGAAATCGTCGCAGCTATTCTAGGAGTCCTAGTCCTGTTCGTAGGCCAAGATCATCTCGTGGGTTGTCGAGGAGTGTCTCACCTGATGCATCCCCAAAGCGTATCAGAAGGGGAAGAGGCTTTAGTGAGAGATACTCTTATGCAAGAAGGTATCGAACTCCTTCTCGGTCTCCTGTGAGGTCTTATCGGTACAACGGAAGAAGTGACAGAGACAGATATTCTAGTCACAGAAGGTATTCCCCTAGGCGCTACAGAAGCCCCCCACCTCGAGGAAGAACGCCACCCAGGTACCGAAGCAGAAGGAGGACACCCTCTGTGTCTCGCAGCCCTCCTCGCTATCGTGTTCGCCGCTATAGCCGAAGCTTAAGCCGAAGCCCAGTTCGCAGTCGTTCCCCTGTTGAGCCATATAGATCTCGTCCTTCTCCTCGCATGGAGAAACGCAGGTCACCTTCTCGAAGCCGAAGCCGCAGTCTATCGCAATCTAGGTCTTCTGTTGAATCACAGTCTCCTCGGAGGGCAAGTAAAGACAGATCTAGGTCGTCCTCCCGAAGCCCAGATGGAAAGAAAGGTTTGGTCTCATATGGTGATGGTTCTCCATATTCAGACCAAAGGTAA 2325 0.4688 MTKKKNPLVFMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVGPRTGKPLHYKGSFFHRILKGSIAEGGDFVNRNGTGGESIYGSNFPDESPKLKHDAPGLLSMAIASRDSHGSLFMITLKADHHLDRKHVVFGKLVQGLDILKKIEDVGDEDGHPSVTVKIIHCGEYNEDGKKMNKLTSETNNHEARRKGKHKKASRDRRKRRKRYYSSESDSDSDSDYESSESDSDSDSDLSSSSSDISSSSDDRRKKRKRSSRKDKHKRRKRRDRRRDKRRRRKEKRSKRRSRRDSESATDSDSESKSDSSSGGESLDAPGKEKKCRDYTLKEAEVQSPLAGDREMHSMHYKRRGEADTPENEEASPKENGERHSNGIGADFRSDRSEERQPDVMDDNPGKSRSRSISPKRAMSKSMSISPRRSESKSPSASPERKISRSPSGSRSPRSPPRRSFSRSPARSIGRSPSRSISRSPVRGSKGRYVSRSPVRTRSRRSVSESPERSPSLSHRSRSSARISSRRSVSRSPVRISRRSISRSPVRSSARSLSRSSGRVPSRRGVSRSPVRSPSRGNRRSYSRSPSPVRRPRSSRGLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRYSPRRYRSPPPRGRTPPRYRSRRRTPSVSRSPPRYRVRRYSRSLSRSPVRSRSPVEPYRSRPSPRMEKRRSPSRSRSRSLSQSRSSVESQSPRRASKDRSRSSSRSPDGKKGLVSYGDGSPYSDQR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1969 774 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 MobiDBLite consensus disorder prediction 724 738 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 500 596 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 318 332 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 179 194 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 405 475 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 221 235 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 739 754 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 600 620 - -
Mibi08g1969 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Mibi08g1969 774 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 256 290 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 345 404 - -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 179 774 - -
Mibi08g1969 774 SUPERFAMILY Cyclophilin-like 4 177 IPR029000 -
Mibi08g1969 774 Gene3D - 1 175 IPR029000 -
Mibi08g1969 774 MobiDBLite consensus disorder prediction 664 693 - -
Mibi08g1969 774 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Mibi08g1969 774 MobiDBLite consensus disorder prediction 195 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1969 Mibi-ChrMibi08 36673147 36678463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1969 25 170 U-box Gene Family AT5G67530 41.216 2.70e-21 97.1