Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1965 ATGATGGAGGGAGTTTTGTGGGAAACAGAGGTTATGCTTGCTTGGGGCAAAATGGATCTGCCTATCAGTCTATGTTTAGCTGCATACAGAGATGATGATATGTTGTTGCATCAGTTGCTGAAGAGGGGCTCAGATCCAAATGAAGCAGATAAAAATGGAAGGAGTTCATTGGTTAGCAGATTTCATATTGCTTCATCTAGAGGCAATGAACATTGTGTGGTTCTACTTCTTGAATATGGAGCTGATCCCAACAAAAAAGGTTATTTTTTTTCTTGTTTATTCGGATTTGAATGGGAAGCAAGCATGGGAGGGCATGAATCTGTGGTAAAGTTTTTAATAGACAATGGTGGAGACCTATCATGTTCGGATGCAGGGCATCTAACATTCCTTGCTGTGGAACAAAACAACTTGGAATTGCTGAAAGAAATTGCCAGGTATGGTGGCGATGTGAGACAGCCCAGAAGAAGCAATGGCACAACGGCACTTCACATGGCAGTATGCGATGGAAACCCAGAGATAGTGAAGTTGCTCGTTCAGCAACGAGCTAATATCTATAAGGCAAGCAATTATGGATGGACTCCTAGGACCTTGGCAGATCATCAAGGCCATGAAGATATCATAGAGATGTTTCAAAACATCAAGCAGGGAAAAATACCCTAA 660 0.4197 MMEGVLWETEVMLAWGKMDLPISLCLAAYRDDDMLLHQLLKRGSDPNEADKNGRSSLVSRFHIASSRGNEHCVVLLLEYGADPNKKGYFFSCLFGFEWEASMGGHESVVKFLIDNGGDLSCSDAGHLTFLAVEQNNLELLKEIARYGGDVRQPRRSNGTTALHMAVCDGNPEIVKLLVQQRANIYKASNYGWTPRTLADHQGHEDIIEMFQNIKQGKIP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1965 219 Pfam Ankyrin repeats (3 copies) 100 184 IPR002110 GO:0005515
Mibi08g1965 219 Pfam Ankyrin repeat 62 86 IPR002110 GO:0005515
Mibi08g1965 219 Gene3D - 20 212 IPR036770 -
Mibi08g1965 219 SUPERFAMILY Ankyrin repeat 24 212 IPR036770 -
Mibi08g1965 219 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Mibi08g1965 219 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Mibi08g1965 219 ProSiteProfiles Ankyrin repeat region circular profile. 157 184 - -
Mibi08g1965 219 PANTHER POTASSIUM CHANNEL AKT1 9 211 IPR045319 GO:0005249|GO:0006813
Mibi08g1965 219 SMART ANK_2a 19 48 IPR002110 GO:0005515
Mibi08g1965 219 SMART ANK_2a 157 186 IPR002110 GO:0005515
Mibi08g1965 219 SMART ANK_2a 123 152 IPR002110 GO:0005515
Mibi08g1965 219 SMART ANK_2a 92 121 IPR002110 GO:0005515
Mibi08g1965 219 SMART ANK_2a 56 85 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1965 Mibi-ChrMibi08 36648036 36648855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1965 1 212 Ion Channels AT4G32500 56.604 1.22e-70 229