Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1952 ATGACTTCAATTCTCTCCATCTCTTCCCCTTCTCTCCCTCGCTCCACTGTTTCCAATTCCCTTTCCCAACTCGATTTTCCCGCCAAATCCCAACGTCCTTCTTCGTCGAGGACCTCCAAATCTCGCTCACTCAAGGCTCACGACTTCGCTTCAGGTCATATCACCTTATCTGCTTCTGCTGCCGGAAGGAGAGGTCTGCTATTCATAGCCACGCTTCCATGGCTACTTCCTTTAACTCAAATCATGGATTTTCATGGAGCAAATGCGATCCAGTCTGGTACAGAGGAATATCAGCTCATTAAAGAAGAAGTCCGCAAAGTATTGTCGAAGGGAAAGGCAGCAGGTGTGCTTCGTCTTGTTTTCCATGATGCTGGGACCTTTGAAATGGATGATAACACAGGTGGCATGAATGGTTCTATTGTATATGAACTTGATAGACCTGAAAATTCTGGGCTAAAGAAATCTATAAAGGTTCTGCAAAATGCAAAGACTCAAATAGATGCTATAAAACCAGTATCCTGGGCAGACATGATTGCTGTGGCTGGGGCTGAAGCAGTTGCTGTATGCGGAGGACCAAATATCCAAGTTTCAGTTGGCAGGCTAGATTCATCGGAGCCTGATCCGGAAGGGAAACTTCCTGAAGAATCTCTCGATGCTTCTGGTTTGAAGAAATGCTTCCTGAGAAAAGGCTTTTCAACACAAGAACTCGTAGCATTGTCTGGAGCCCATACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAATTCATATTACAAGGTTCTTCTTGAGAAGCCATGGGGTTCTTCAGGCGGTATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTCGTTGAGGATGATGAATGTTTAAGGTGGATTAAAAAATATGCGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATACTGGTGTGAGGTGGAAAAGCTTGTAA 987 0.4417 MTSILSISSPSLPRSTVSNSLSQLDFPAKSQRPSSSRTSKSRSLKAHDFASGHITLSASAAGRRGLLFIATLPWLLPLTQIMDFHGANAIQSGTEEYQLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEMDDNTGGMNGSIVYELDRPENSGLKKSIKVLQNAKTQIDAIKPVSWADMIAVAGAEAVAVCGGPNIQVSVGRLDSSEPDPEGKLPEESLDASGLKKCFLRKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWGSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNTGVRWKSL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 190 202 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 299 323 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 131 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 229 250 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 113 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 171 189 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Plant ascorbate peroxidase signature 211 228 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Mibi08g1952 328 ProSiteProfiles Plant heme peroxidase family profile. 113 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 SUPERFAMILY Heme-dependent peroxidases 97 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 Pfam Peroxidase 102 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 ProSitePatterns Peroxidases active site signature. 113 124 IPR019794 GO:0004601
Mibi08g1952 328 Gene3D - 101 322 - -
Mibi08g1952 328 FunFam L-ascorbate peroxidase 103 220 - -
Mibi08g1952 328 MobiDBLite consensus disorder prediction 23 40 - -
Mibi08g1952 328 MobiDBLite consensus disorder prediction 23 44 - -
Mibi08g1952 328 PRINTS Haem peroxidase superfamily signature 172 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Haem peroxidase superfamily signature 190 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g1952 328 FunFam Adenylate/guanylate cyclase 213 315 - -
Mibi08g1952 328 Gene3D Peroxidase, domain 2 213 315 - -
Mibi08g1952 328 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 94 327 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1952 Mibi-ChrMibi08 36513967 36517723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1952 113 318 Peroxidase AT4G16270 32.197 2.61e-23 97.1