Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1951 ATGAAAAAAACCTGGTCTTTCATCCATATCATCATCGTCCTGTTCCTGTCTAATCTACTCTTGTCGGAAATCTGCCATGCTGGAATTCAGAGCACCGGCATGATCTTTCCTGGGTTTCAAGGCTCTCAAATGAATTGGATTGACAAAAGCGGCTTGTTCCTCGTGTCAAACAATGGAGAATTCATGTTTGGCTTCATCACTACCCAGAATGACAGCACGTTATATCTCCTAGTAATTGTTCACGGTGACAATACCCAAGTGGTCTGGACGGCAAATAGAGACCTCCCCGTTAGCAATTCTGATAAATTCGTGTTTGACAAATCCGGAAATGTCTTTCTTCAGAAAGGGAACGGTGTGGTTTGGTCTACAGATACGAAGGGGAAAGGAGTTTTTTCAATGGAATTAAAGGACACAGGAAACTTGGTTTTGCTTGGTGATGATAATAGTACAATTATTTGGCAGAGTTTTAACCATCCAAGTGATACCTTGTTGCCAATGCAGGAATTCAAGGAGGGAATGAAACTTACCAGTGAGCCTGACGAAAATAACTTGACCAGCATTATGGAGATCAAGTCTGGTGATTTAGTTCTCTCTGCTGGGTTTCATAATCCACAGCCTTATTGGTCTATGCAAAATGATGATCGCAAAATCATCAATGAAGATGGTAACTCGGCGGCTTCAGCCTCCATTAGTGCAAACTCGTGGAAGTTCTATGATAAGAATAAGTCCTTGTTATGGCAGTTCATTTTTGCTCAAGATTCATCAGGCACAAATTCCACTTGGGTTGCTGTTCTGGGGAGTGATGGTTTCATCACTTTCTCTAATCTCAACAATGGAGGTTCAATTACTCCTTCACCAACAAGAATCCCTAAAGATGCTTGTAGCACACCTGAACCTTGTGGTCCTTATAACGTATGCACGAATGATAACAAGTGTCACTGTCCTGCTGCTATGAGATCTCATGCCAATTGCAATCCAGGGTTTGCCTCTCCTTGCGATGGCTCAAATGGATCTGTGGACCTTGTGGAAGGTGACAATGGACTTGGTTACTTTGCTCTTGGATTCCTTTCTCCATCCTCCAAAACTGATTTGAATGGCTGCAAGTCTTCCTGCCTGGGAAATTGCTCCTGTCTTGCCATGTTCTTCCACAGCAATTCAGGGAATTGCTTCATGTTGGATAGTATAGGAAGTTTTAAGAATATGGACTCAGATTCGGGTTTTGTTTCTTACATTAAGGTCTCTAGTAATGGAGGATCTGGCTCTTCAGGAGGTGGAAGCAACAGCAAGTACACTGTGGTGGTTGTGGTTATAGTCATAACGACTTTGCTTGTGATTTCGGGTTTATTCTATGTGGGACTTAGATGCTACAGAAGAAAGCAGAGATTGCCCGAGTCTCCAAGAGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGTATGCCTGTTCGTTTCAGCTATAGTGAACTGCAAACAGCAACTAAGAACTTCTCTGAGAAGCTTGGGCATGGAGGGTTTGGCTCAGTTTATAAAGGAGCTCTACCAGATGGCACTCTTTTAGCTGTGAAGAAGTTAGAAAGCATAGGCCAAGGGAAGAAAGAATTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCATCATCTGGTTAGGCTTAAAGGATTCTGTGCCGAAGGAACTCATCGCCTTCTTGCTTATGAGTTTATGGCAAATGGGTCATTAGATAAATGGATATTCAAGAAAAACCAAGGAGAATTCTTGTTGGATTGGGATACAAGGTTTAATATAGCCTTGGGCACAGCCAAAGGGCTTGCTTACCTGCATGAGGATTGTGATTCAAAGATTGTTCATTGTGATATCAAACCAGAAAATGTTCTTCTTGATGAGAACTTCCTCGCCAAAGTTTCGGATTTTGGGTTGGCTAAACTCATGACTCGTGAACAAAGCCATGTTTTCACAACACTAAGGGGAACCCGAGGATATCTTGCACCGGAGTGGATCACAAACTATGCTATATCAGAGAAAAGCGATGTATATAGCTACGGGATGGTACTACTAGAGATCATTGCTGGAAGGAAAAATTATGATCCTAACGAGTCTTCAGAGAAATCCCACTTCCCAACTTATGCTTTCAAGATGATAGAAGAAGGGAAGTTGAAAGATCTTTTTGATTCAAAGCTGGGAGTAAACGAAAATGATGAAAGGTTTCATATGGCCCTCAAAGTTGCATTGTGGTGCATACAGGAAGATATGTCTCTGAGGCCTTCCATGACCAAAGTTGTTCAAATGCTTGAAGGTCTCTGTACTGTTCCTAAGCCACCACCATCTTCTCCTATGGGTTCTCGCCTTTTCTCGTCTTTCTTCAAGTCTATGAGTGAAGGTGGTACCTCTTCAGGACCTTCAGACTGTAACAGTGATGCATATCTTTCAGCAGTTAGGCTTTCTGGACCAAGATAA 2463 0.4235 MKKTWSFIHIIIVLFLSNLLLSEICHAGIQSTGMIFPGFQGSQMNWIDKSGLFLVSNNGEFMFGFITTQNDSTLYLLVIVHGDNTQVVWTANRDLPVSNSDKFVFDKSGNVFLQKGNGVVWSTDTKGKGVFSMELKDTGNLVLLGDDNSTIIWQSFNHPSDTLLPMQEFKEGMKLTSEPDENNLTSIMEIKSGDLVLSAGFHNPQPYWSMQNDDRKIINEDGNSAASASISANSWKFYDKNKSLLWQFIFAQDSSGTNSTWVAVLGSDGFITFSNLNNGGSITPSPTRIPKDACSTPEPCGPYNVCTNDNKCHCPAAMRSHANCNPGFASPCDGSNGSVDLVEGDNGLGYFALGFLSPSSKTDLNGCKSSCLGNCSCLAMFFHSNSGNCFMLDSIGSFKNMDSDSGFVSYIKVSSNGGSGSSGGGSNSKYTVVVVVIVITTLLVISGLFYVGLRCYRRKQRLPESPRGSSEEDNFLENLTGMPVRFSYSELQTATKNFSEKLGHGGFGSVYKGALPDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHHHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFKKNQGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDENFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIAGRKNYDPNESSEKSHFPTYAFKMIEEGKLKDLFDSKLGVNENDERFHMALKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPPSSPMGSRLFSSFFKSMSEGGTSSGPSDCNSDAYLSAVRLSGPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1951 820 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1951 820 CDD STKc_IRAK 502 769 - -
Mibi08g1951 820 PIRSF SRK 4 816 IPR024171 GO:0004674
Mibi08g1951 820 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1951 820 Gene3D - 48 158 IPR036426 -
Mibi08g1951 820 CDD PAN_AP_plant 328 413 - -
Mibi08g1951 820 Gene3D Phosphorylase Kinase; domain 1 465 570 - -
Mibi08g1951 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 211 IPR036426 -
Mibi08g1951 820 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Mibi08g1951 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 777 - -
Mibi08g1951 820 FunFam S-receptor-like kinase 5 571 775 - -
Mibi08g1951 820 CDD B_lectin 47 159 IPR001480 -
Mibi08g1951 820 FunFam serine/threonine-protein kinase PBS1-like 465 570 - -
Mibi08g1951 820 FunFam Serine/threonine-protein kinase 41 157 - -
Mibi08g1951 820 Pfam D-mannose binding lectin 87 170 IPR001480 -
Mibi08g1951 820 Gene3D Transferase(Phosphotransferase) domain 1 571 774 - -
Mibi08g1951 820 SUPERFAMILY Protein kinase-like (PK-like) 477 767 IPR011009 -
Mibi08g1951 820 SMART blect_4 45 159 IPR001480 -
Mibi08g1951 820 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1951 820 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Mibi08g1951 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1951 Mibi-ChrMibi08 36508669 36511131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1951 443 778 Receptor kinase-like Gene Family AT5G20050 43.855 8.85e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi08g1951 Pkinase 4e-51 CL0016