Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1944 ATGACTCGTAACCACATATGTCTGTGTTTCATACAGGTTCATATTGCTCAAAGGGGGCCTATTCAGCCACTGATTGACATGCTTAAGTCTCCCGATGCAGAGGTTCAGAAAATCTCTGCTTTTGTACTTGGGAGTCTGGCTCAGGACACTCACAATCAAGCTGGTATTGCTTATAATGGAGGTATAGAGCCTTTACTCAACCTCCTTTGCTCCAAGGATGAATGTCTCCCGCGTGGTGCAGCTTTTGCTCTGTATGGTCTTGCTGATAATGAGGTGAAGTCGGCTGGTGGTGTTCAAAAACTACGAGATGGAGATTTCGTGGTTCAACAGGTGCTGAAACAACTGTTGCATCTTATGCGTTTTAGAGAAAAGGCTGTTCAAAGATGTGTGGCTCTGGCTCTTGCTGATTTATGTGCACCTGAGGATTGGAAATTCATTTTTGTTGACAAAAATGGACTTGAGGTTTTGCTGGATCTTCTAGAATCTACAAACCTCAAACAGCAACGCGAGGCTTTAATGGCACTTCACTCGTTGGTTGTCAAAACCACATCCGTCTTTGCCTTTGATGTTCCTCCGCCCCCAACTCACAAGCGACTCTGCAACTCAAGTCACCTTACTGCAACTCCAGCCAACCATATTTCAACTCCAGTCACCAAAACTCTAGCCACCATATTTACTGTTTTATTTTCATTGACTGCTGGTAAACCGTTTTATGCTCACCGAATTTGTTTACTTGCTTCCTCTGATGCGTTTCGAGCAATGTTTGATGGTGATTATCGGGTGGGCATTGATGATTGTTGA 801 0.4407 MTRNHICLCFIQVHIAQRGPIQPLIDMLKSPDAEVQKISAFVLGSLAQDTHNQAGIAYNGGIEPLLNLLCSKDECLPRGAAFALYGLADNEVKSAGGVQKLRDGDFVVQQVLKQLLHLMRFREKAVQRCVALALADLCAPEDWKFIFVDKNGLEVLLDLLESTNLKQQREALMALHSLVVKTTSVFAFDVPPPPTHKRLCNSSHLTATPANHISTPVTKTLATIFTVLFSLTAGKPFYAHRICLLASSDAFRAMFDGDYRVGIDDC 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1944 266 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 19 61 IPR000225 GO:0005515
Mibi08g1944 266 ProSiteProfiles BTB domain profile. 225 266 IPR000210 GO:0005515
Mibi08g1944 266 Gene3D - 9 103 IPR011989 -
Mibi08g1944 266 SMART arm_5 49 89 IPR000225 GO:0005515
Mibi08g1944 266 SMART arm_5 140 180 IPR000225 GO:0005515
Mibi08g1944 266 SMART arm_5 99 139 IPR000225 GO:0005515
Mibi08g1944 266 SMART arm_5 10 48 IPR000225 GO:0005515
Mibi08g1944 266 Gene3D - 104 185 IPR011989 -
Mibi08g1944 266 SUPERFAMILY ARM repeat 13 182 IPR016024 -
Mibi08g1944 266 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 12 260 IPR044282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1944 Mibi-ChrMibi08 36461794 36464757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1944 12 88 U-box Gene Family AT5G40140 41.558 4.36e-09 55.1