Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1943 ATGTTCTTCCATTTCTTTCTGCTATTGAAAATTGATGGTGACGTGTTAGTAATCCTATCAGGTTCAGCCAATGGGATAACATGCCCATTCGCATCATCACGTGGACTTCACATGCCCTGGACCATCTCTCCCTCTTTCTCTCTTGTGCTCTGTAGGAGGCCAAGTTTCTGTATTGAAAGTCACAGGCAAGTAAAAATCAAGCGTAGTTTTGAAGAGTCATTTGGGTGTTCTTCAAAAACTCTGCCTTTACTGGTATGGAATGGACAGCCAAACGAGGAAGATGATGACAGTGGTGATGGGAAGAGAAACAGAAACACTCATATGGAAAAGGAGGAGAATGAAGAAGAAAACAGTTTAGTGGGATGGCCACCCATTAAATCATGGAGGAGGAAGAAAGTCCATCATCAACAACACCCAAGAGTCCCAATCATCAGGAACGATGGGACGCTAGCTGAGAATGGAAATAGAGGATCAAACTCTTCATATGTTAAGGTTAAGATGGAAGGAATAGCTATAGGACGCAAGATAGATTTGAGGCTACACAGTTCTTATGAGAGTCTTGCAAGTGAGTTAATTAGCATGTTTGATCAAAACCAGAAGCCTGAGGAAGATAATGAAAGTTTTACACTCAAGTATCAGGACGAAGAAGGGGACTGGCTGGTTGCTGGAGATGTTCCTTGGCAATCCTTCATTGATACTGCTAAACGCTTGGAGATAGTAAGGAGTGGCGTTGAAGAATCGAATCCACTTGACAGAAAATAG 762 0.4239 MFFHFFLLLKIDGDVLVILSGSANGITCPFASSRGLHMPWTISPSFSLVLCRRPSFCIESHRQVKIKRSFEESFGCSSKTLPLLVWNGQPNEEDDDSGDGKRNRNTHMEKEENEEENSLVGWPPIKSWRRKKVHHQQHPRVPIIRNDGTLAENGNRGSNSSYVKVKMEGIAIGRKIDLRLHSSYESLASELISMFDQNQKPEEDNESFTLKYQDEEGDWLVAGDVPWQSFIDTAKRLEIVRSGVEESNPLDRK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1943 253 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 101 242 IPR003311 GO:0005634|GO:0006355
Mibi08g1943 253 SUPERFAMILY CAD & PB1 domains 156 239 - -
Mibi08g1943 253 MobiDBLite consensus disorder prediction 94 117 - -
Mibi08g1943 253 ProSiteProfiles PB1 domain profile. 160 247 IPR000270 GO:0005515
Mibi08g1943 253 MobiDBLite consensus disorder prediction 86 119 - -
Mibi08g1943 253 Gene3D - 155 249 - -
Mibi08g1943 253 Pfam AUX/IAA family 63 197 IPR033389 -
Mibi08g1943 253 Pfam AUX/IAA family 206 242 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1943 Mibi-ChrMibi08 36416334 36419361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1943 149 242 B3 DNA Binding Superfamily AT3G61830 38.947 7.57e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi08g1943 AUX_IAA 3.7e-35 CL0072