Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1938 ATGGCTAAAGATGTCACAGCCACTCCGTCAACACCTTCTTTTGATTATGTTGTCTTGGGGGATGATCATGAGAACCTAAGAACTGTCAGAGGCACATCCAGCCACACAAGTCCTTGGATTGAACCCGAGAGGTTGAAACTTCAGCACAGGATTGGCCGGGGACCATTTGGTGACCTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCAGCCAAGATGTTGTATCCAATCAAAGAGAACAACCTGAGGATTGTATTAGATAAATTTGATGAATTATATCATAAGTGCCAAGGAGTGGCTGGGGCTTGCTGGCTCCATGGATTTTCAATTCTAAACGGGAGGATATGCATCATTATGAATTTCTATGAGGGATCTGTTGGTGACAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCATTGCATGATGTGTTGAGGTATGGAATCAATCTGGCTCAGGGTATCCTGGAACTTCATTCAAAAGAAATCCTAATTCTAAACCTTAAGCCCTTTAATGTGCTTCTTGATGATAATGACCAAGCTATTCTGGGAGATTTTGGTATTCCCAGTCTTCTGCTTGGCCTCTCATTTCAAGGCTCAGATATGGTTCACAGGCTGGGGACTCCAAATTACATGGCTCCAGAACAATGGCAGCCTGAAGTTGGAGGCCCTATATCCTTCGAGACAGATTCATGGGGATTTGGGTGTACCATTGTGGAAATGTTGACTGGCAATCAACCTTGGTATGGAAAATCTGTTGGTGAAATATACCAATTAGTAGTTAAAAAACATGAAAAACCTCTTATTCCAAGTGGTCTTCCTCCTTCAATTGAGAATATCCTCAGCGGGTGCTTTGAGTATGATTTAAGGAATCGCCCCTCAATGATGGATATTTTGAGCGTTTTTAAAAGCTCTCTGGATGCATTAGCCCATGATGGAGGATGGCAATATCCCGGAACCATGAAGGTTGTTGAAAAATCAAGCAGCACAGGCTATACGGATTGGTTTGTTTTAAAAGACCGTCTCCAGGTGAATGACATGGTAAGATCCAGAAAACCAACCAATTCATCCAAACGTCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGTAGTTTAGATCATGGTTTTGTTTTAGTGAGGATCCATGGTATTCATGACCCTTTAAGGATTCATAGTTCAACTCTGGAGCGTGTCACATTTGGTTTGGCAGCTGGTGATTGGATACGCTTGAAGGAAGAAGATGAGAAGCACTCGCCAGTGGGTATTCTTCATTCCGTTAGCCGCGAACGCGATGGTAGAGTGGCTGTTGGATTTATTGGAATGCAAACCCTTTGGAGAGGCAGTTCTTCAGAGCTTGAAATGGCAGAGCCTTACTTTGTGGGGCAGTTTGTACGGCTTAAAGTCAATGTTTTGAGTCCTCGATTTGAATGGCCTCGTAAAAGGGGACGGACCTGGCCTACTGGAAGGATATCATGGATCCTTCCAAACGGGTGTCTAGTTGTCAAATTCCCAGGGATGTTGACTTTTGGTGATGAAGCAGGCACTTTCTTAGCTGATCCATCCGAGGTTGAAGCGGTTAACTTTAGTACTTGTCCTGGGATCGTAGAGAAATATAAACATGTAGAGGATCATCATTGGATAGTCAGACCTGCCCTGATTGCATTTGGCCTGTTTACAGCTTTGAAATTAGGTTTGTCAATTGGAAAGAAAATGGGGAAGAAAAAGGTGCACGCAAAAGAGAGCGAAAATCAGCACATAGATGCCAACAACTCTGCTTGGAGATCTTCTGGTGCTGCAAATCCTGGCAACACAGTATGGGTTCCTTCAGTTTCCAATATTCTTTTCAGAGAAGGCGCTAATGCACCAACTGGTCGGTAG 1911 0.4349 MAKDVTATPSTPSFDYVVLGDDHENLRTVRGTSSHTSPWIEPERLKLQHRIGRGPFGDLWLATHHQSTEDYDEYHEVAAKMLYPIKENNLRIVLDKFDELYHKCQGVAGACWLHGFSILNGRICIIMNFYEGSVGDKMARLREGRISLHDVLRYGINLAQGILELHSKEILILNLKPFNVLLDDNDQAILGDFGIPSLLLGLSFQGSDMVHRLGTPNYMAPEQWQPEVGGPISFETDSWGFGCTIVEMLTGNQPWYGKSVGEIYQLVVKKHEKPLIPSGLPPSIENILSGCFEYDLRNRPSMMDILSVFKSSLDALAHDGGWQYPGTMKVVEKSSSTGYTDWFVLKDRLQVNDMVRSRKPTNSSKRQNMDVPEGTVVGLERSLDHGFVLVRIHGIHDPLRIHSSTLERVTFGLAAGDWIRLKEEDEKHSPVGILHSVSRERDGRVAVGFIGMQTLWRGSSSELEMAEPYFVGQFVRLKVNVLSPRFEWPRKRGRTWPTGRISWILPNGCLVVKFPGMLTFGDEAGTFLADPSEVEAVNFSTCPGIVEKYKHVEDHHWIVRPALIAFGLFTALKLGLSIGKKMGKKKVHAKESENQHIDANNSAWRSSGAANPGNTVWVPSVSNILFREGANAPTGR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1938 636 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Mibi08g1938 636 Gene3D Transferase(Phosphotransferase) domain 1 41 366 - -
Mibi08g1938 636 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1938 636 PANTHER OS06G0639500 PROTEIN 1 632 - -
Mibi08g1938 636 CDD STKc_PknB_like 46 311 - -
Mibi08g1938 636 MobiDBLite consensus disorder prediction 589 608 - -
Mibi08g1938 636 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1938 Mibi-ChrMibi08 36354218 36357228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1938 123 311 MAP Kinase Kinase Kinase AT3G22750 25.789 4.96e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Mibi08g1938 PK_Tyr_Ser-Thr 1.4e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1938 08 36354218 36357228 Mibi08g1938 08 36354218 36357228 ECH