Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1923 ATGGGGAAGCCGACTGGTAAGAAGAAGGATTCTGTTACACCCAAGGCTGCAAATGCTAGCGGCAAGCCTAGCAAGACATCTGAGAGGACTTCCAAAGCCTTCGATGAAGACACAGCTATATTCATCAACATGTCACAGGATCTCAAGGAAGAAGGTAATAGACTCTTTCAGAAAAAGGACCATGAAGGGGCTATGTTGAAGTTTGAAAAGGCCCTCAAGCTACTTCCTGGAAACCACATAGATGTGGCACACTTGCGTACCAATATGGCTGCGTGTTATATGCAACTCGGTCTTGGTGAGTACCCTCGAGCAATTAATGAATGTAATTTAGCTCTTGAAGTATCTCCCAGATATAGCAAGGCTCTATTGAGAAGAGCGAAGTGCTATGAAGCATTGAATCGATTTGATTATGCTCTCAGAGATGTTAATTTTGTTTTGAGTGTGGAGCCTAATAATCTCAATGCATTGGAGGTTCTCGGGAGTTTGAAAAAGACCATGGAAGAGAAAGGCATCACTGTTGATGAGAAAGATTTGGCGAGTTTAGAGCTGCCTACCACTGCCCCCATGCGAAAAGTTGTAAGAGAAAAACTGAAGAAAAAGAAAAGCAAAAAAGGCGAGAGCAAGCCAAAGGATAAGGTGATTCTTGAGGATACTGTGAATGTTAAAGATAAAGAAGTGGTGACAAAGACAATTGCAAAAAAGGAAGTGATGCCTAAAACAATTGCAAAAAAGGAAGTGGTTCTGGAGCCTGTTAAAGAAGAAAAAGTAGTCACAAAGACGGTGAAGCTGGTATTTGGAGAGGATATAAGGTGGGCACAGTTGCCACTGAATTGTGGAATGAGGTTGGTGAGGGATATAATTAAGGATAGGTTTCCTGGATTGAAGGGTGTTCTTGTTAAATATAAGGATCAAGAAGGTGATTTGGTTACTATCACTACTACTGATGAATTAAGATTAGCTGAATCTTCAGGTGACGCCTTGGGTTCCCTTCGGCTCTATATTACAGAAGTTGATCCAGAGGAGGAACCAACTTATGATGGGATATCCAATGGGGATGAGATGCAAGGTGATGGTATTGAGCATGGGCCAACGGAACCGGGAAAGGATATAGCAACTAAACTGTCTAATGTGGAGGATTGGATAATTCAGTTTGCCAGGATGTTCAAGAACCATGTTGGGTTTGATTCTGATTCATACTTGGATATGCATGAGGAGGGAATGAAGCTATATTCAGAAGCCTTGGAGGATGTGGTAACGAGTGATGATGCTCAAGAGCTTTTTGAAATCGCTGCTGATAAATTTCAAGAGATGGCAGCTTTGGCATTGTTTAATTGGGGGAATGTTCACATGTCCAGGGCAAGGAGGCGTGTTCCCATTTCAGAGGACGGGTCAAAGGAATCTGCTTATGAGCGAATTAAAGCTGCATATGAGTTGGCAAGAAAGGAGTACAAGAGAGCGGAGATGAGATATGAAGAAGCCTTGAAAATCAAACCAGACTTCTATGAGGGATTTCTGGCACTTGGCCATGAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTATTATGCGATGGCATGCAAAACGAATTTAGAGGATGGCCCTTCCAGTGAGGTTTTATTACTATATAACAAGGCAGAGGACAGCATGGATAGAGGCATGTTGATGTGGGAGGAGATTGAAGAGCAACGTTTAAATGGACTGTCCAAATTGGATAAATATAGAGCGCATTTGGAAAAATTGGGCTTAGATGGACTTCTCAAGGATATTTCTTCTGATGAAGCTGCAGAGCAGGCTGCAAATGCAAGGTCACAAATATATATTTTATGGGGCACCATATTGTATGAGCGTTCTGTTGTGGAATATAAGTTAGGCTTACCTTCATGGGAGGAATGTTTGGAGGTTGCAGTTGAGAAGTTTGAGCTTGCTGGAGCTTCTCCAACAGATATAGGGGTCATGATAAAGAATCATTGCTCCAATCAAACTGCACTAGAAGGTTTAGGGTTCAAAATTGATGAGATAGTCCAGGCGTGGAATGAAATGTATAATGCCCAGAGGTGGCAGTTTGGTGTACCATCATTTCGTCTGGAACCATTGTTCCGGCGGCGTGTTCCGAGACTTCATCACATCTTGGAGCATTTTTGA 2139 0.4254 MGKPTGKKKDSVTPKAANASGKPSKTSERTSKAFDEDTAIFINMSQDLKEEGNRLFQKKDHEGAMLKFEKALKLLPGNHIDVAHLRTNMAACYMQLGLGEYPRAINECNLALEVSPRYSKALLRRAKCYEALNRFDYALRDVNFVLSVEPNNLNALEVLGSLKKTMEEKGITVDEKDLASLELPTTAPMRKVVREKLKKKKSKKGESKPKDKVILEDTVNVKDKEVVTKTIAKKEVMPKTIAKKEVVLEPVKEEKVVTKTVKLVFGEDIRWAQLPLNCGMRLVRDIIKDRFPGLKGVLVKYKDQEGDLVTITTTDELRLAESSGDALGSLRLYITEVDPEEEPTYDGISNGDEMQGDGIEHGPTEPGKDIATKLSNVEDWIIQFARMFKNHVGFDSDSYLDMHEEGMKLYSEALEDVVTSDDAQELFEIAADKFQEMAALALFNWGNVHMSRARRRVPISEDGSKESAYERIKAAYELARKEYKRAEMRYEEALKIKPDFYEGFLALGHEQFEQAKLCWYYAMACKTNLEDGPSSEVLLLYNKAEDSMDRGMLMWEEIEEQRLNGLSKLDKYRAHLEKLGLDGLLKDISSDEAAEQAANARSQIYILWGTILYERSVVEYKLGLPSWEECLEVAVEKFELAGASPTDIGVMIKNHCSNQTALEGLGFKIDEIVQAWNEMYNAQRWQFGVPSFRLEPLFRRRVPRLHHILEHF 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1923 712 SUPERFAMILY TPR-like 398 549 IPR011990 GO:0005515
Mibi08g1923 712 SMART tpr_5 45 78 IPR019734 GO:0005515
Mibi08g1923 712 SMART tpr_5 467 500 IPR019734 GO:0005515
Mibi08g1923 712 SMART tpr_5 83 118 IPR019734 GO:0005515
Mibi08g1923 712 SMART tpr_5 119 152 IPR019734 GO:0005515
Mibi08g1923 712 CDD PB1 260 335 - -
Mibi08g1923 712 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Mibi08g1923 712 SUPERFAMILY TPR-like 34 167 IPR011990 GO:0005515
Mibi08g1923 712 MobiDBLite consensus disorder prediction 1 32 - -
Mibi08g1923 712 Gene3D - 259 337 - -
Mibi08g1923 712 SMART PB1_new 258 337 IPR000270 GO:0005515
Mibi08g1923 712 ProSiteProfiles PB1 domain profile. 258 337 IPR000270 GO:0005515
Mibi08g1923 712 PANTHER PROTEIN CLMP1 1 711 IPR044517 -
Mibi08g1923 712 Gene3D Tetratricopeptide repeat domain 41 212 IPR011990 GO:0005515
Mibi08g1923 712 Coils Coil 469 496 - -
Mibi08g1923 712 SUPERFAMILY CAD & PB1 domains 257 346 - -
Mibi08g1923 712 Pfam PB1 domain 259 335 IPR000270 GO:0005515
Mibi08g1923 712 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1923 Mibi-ChrMibi08 36201262 36203486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1923 26 152 Calmodulin-binding Proteins AT3G25230 31.655 3.05e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1923 08 36201262 36203486 Mibi05g0749 05 7025388 7029979 CCT