Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1913 ATGGGCAGGCCACAACAAAGATACCGAGGCGTAAGACAAAGGCATTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACTAGAATTTGGCTTGGTACTTTTGAAACAGCAGAAGATGCAGCAAGAGCCTATGATGAAGCAGCAAGGCTAATGTGTGGGCCCAGAGCAAGAACCAACTTCCCTTATAACCCAAATGTGTCTCAGTCTTCTTCCAAGCTTCTCTCTGCAACTTTGACTGCCAAACTCCATAGATGCTATATGGCTTCTCTGCAAATGACTAGACCTTCATTACCAGAACCTCAGAGAATGGTTTCTTCGCCTAAAAATGAAGTTTCCAGTAGCAGCAGCAACTCTGTTGATACAGAGTTTTCACGCAAGAGAGGACAAGAGGAGATAGAAGAATCAGAGGCTAATTGGGTTATGAAGAAGGTGAAGGTGGAAACTAGTCAGCAATTCGAACCTCTTGAGGAAGATCACATTGAGCAGATGATTGAGGAATTGCTTTATTACGGTTCTTTTGAACTCTGCTCTGTTATGGACTAA 552 0.4366 MGRPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNVSQSSSKLLSATLTAKLHRCYMASLQMTRPSLPEPQRMVSSPKNEVSSSSSNSVDTEFSRKRGQEEIEESEANWVMKKVKVETSQQFEPLEEDHIEQMIEELLYYGSFELCSVMD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1913 183 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Mibi08g1913 183 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 129 - -
Mibi08g1913 183 MobiDBLite consensus disorder prediction 99 125 - -
Mibi08g1913 183 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mibi08g1913 183 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 MobiDBLite consensus disorder prediction 99 137 - -
Mibi08g1913 183 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mibi08g1913 183 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1913 Mibi-ChrMibi08 36070806 36071439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1913 1 182 AP2-EREBP Transcription Factor Family AT5G25190 67.760 3.56e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g1913 AP2 7.5e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1913 08 36070806 36071439 Mibi05g0763 05 7122833 7123503 CCT