Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1910 ATGGAAGAAATGAGGAAAAGGAACGAACCATGCCTGCACCATCAAGTTGGTGAAGAGGAAGACGAAAACTACCAAGAAGATAAGGTAAGGACAGAAACTTTATTTGATCTTAATGCTTCTGGTCTTGATGAGAACAACCCAGAACTCAATCTCATCACATCCCTGGATCAAAGTTCATCAAAAACATCATCAGAAACATGTGCTGACCATCATGGTTCTGGTTCAGAAGCAGAACCAAGATTTTTCTCATGTAATTACTGCCAGAGAAAATTCTACAGCTCACAAGCACTTGGGGGACACCAAAATGCACACAAGAGGGAGAGATCAATAGCCAAAAGAGGACAGAGACTTGGTTCACAAATAATGGCTTCAGCATCAGCTTATGGTCATCCTTTTTTGCATAATTTTGGGTATGCAAGTATGGCTTCTCTGCCTCTTTATGGTGCTTCTTGCAATAATAGGCCTCTGGGGATTCAAGCTCATTCTTTGATCCACAAGCCATGTCATAATAATAATAGTGTTCATCATAGGGCATGGTCAAACCAGCCTGGGATTGGGAAGCTAGAGATGGTGAATTTTCATAAAACGACGTCGGGTAGTGTAGGGAGGTTTGAAATTGTTAAGGCCAAGATGGGTTCTGCAGAAAGGGAGGAGATGAGTGGGTTTTTGGTGGGTGGGACTCATTGTTTGAAGACTAATCCATCAGAAGAAATGAATAAGCAGCTTGATTTGTCTCTTAAGCTGTAG 747 0.4177 MEEMRKRNEPCLHHQVGEEEDENYQEDKVRTETLFDLNASGLDENNPELNLITSLDQSSSKTSSETCADHHGSGSEAEPRFFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGSQIMASASAYGHPFLHNFGYASMASLPLYGASCNNRPLGIQAHSLIHKPCHNNNSVHHRAWSNQPGIGKLEMVNFHKTTSGSVGRFEIVKAKMGSAEREEMSGFLVGGTHCLKTNPSEEMNKQLDLSLKL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1910 248 MobiDBLite consensus disorder prediction 1 29 - -
Mibi08g1910 248 SUPERFAMILY beta-beta-alpha zinc fingers 79 109 IPR036236 -
Mibi08g1910 248 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Mibi08g1910 248 MobiDBLite consensus disorder prediction 55 77 - -
Mibi08g1910 248 Gene3D Classic Zinc Finger 56 130 - -
Mibi08g1910 248 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 248 IPR044246 GO:0009788
Mibi08g1910 248 MobiDBLite consensus disorder prediction 55 70 - -
Mibi08g1910 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1910 Mibi-ChrMibi08 36044002 36044748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1910 16 248 C2H2 Transcription Factor Family AT5G10970 39.689 1.46e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi08g1910 None None None