Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1906 ATGACTGTGGAAACTAGAGCTGATGAACCCAGAGGACAATTTCCTGTAGGAATGCGTGTTCTTGCTGTTGATGATGACCCAACTTGTCTCTTGGTGTTGGAAACTCTCCTTCGGAGATGCCAATATCACGTAACGACGACCAATCAGGCAATAACAGCTTTGAAGATGCTAAGAGAAAACAAAAACATGTTCGACCTGGTCATTAGTGATGTTCATATGCCTGACATGGACGGATTTAAGCTTCTTGAGCTGGTCGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGCAAATGGAGACCCCAAGCTGGTGATGAAGGGGATTACGCATGGGGCTTGTGACTATCTCCTGAAACCTGTACGGATTGAGGAGCTCAAGAACATTTGGCAGCATGTGATAAGGAGGAAGAAATTTGACCCAAAGGAGAAAAACAGTACTTGCAATCAAGACAAGCCTCATTCTGGTGCCACCAACAACGGATTAGGTCCGGCAGGAGCTGGGAATACTGATCAAAATGGAAAGCTCAACAAGAAAAGGAAGGATCAGGATGATGAAGATGATGATGAGCATGAGCATGACAGTGATGATCCTTCAACACAGAAGAAGCCTCGTGTTGTTTGGTCTGTCGAGCTTCACAGAAAGTTTGTTGCTGCTGTTAATCAATTAGGCATTGACAAGGCTGTGCCTAAGAAGATTCTGGATTTGATGAATGTTGAGAAACTCACAAGGGAAAACGTGGCAAGCCATCTCCAGAAATATAGGTTGTATCTGAAGAGAATCAGCTGTGTAGCAAACCAGCAGGCTAATATGGTGGCAGCCTTAGGTAGCGCAGATGCATCATATCTGAGAGTGGGATCTCTGGGTGGGATTAAACATCTTCAGCCTTTGAGTGCTTCTGGACAGTTCCAGAACAATGTTTACCGATCCCTCCCCTATGGTGGGATGATTGGAAGACTGAACTCTCCTGCTGGCCTTGGTGTTCATGGGTTACCTTCATCAGGAATTCTTCAGTTGAGTCATGGGCAGAATTTAAACAACAACAACAACAACAACAACGATCCTCTCAAGTTCCAGTCATCCATGGTTCCTGTCAATCAGAATCAGAATGGCGGTTCACTTCAGGGCATGCCGGTGTCTGTTGGGATCGACCAATTACAACCCAAAAAGGTTGTCAGTTCCGTTCAAGTTCCTACCACTGGTTATGATGATAAAACAGTGTCTCTCATCTCAAACAAGTTGCCTGATCCGGGAGCAAGAGTAAGCTCTAGTTGCTCTAGACCTCCACTCGTGGGCATTGGGACCAATGGCTTCTTGTTAGAACCAAAATCTCAAGACACGCACGGTGGGAGAGGGTATGAGAATCTTGCCTCAGTAGCCTCTCAACAACATCCAGAATTTTCTATGCCTCTGATGGATAATCATAATGGGAGGTGTCATGATGATTGGCCTAGTGCTGTGCATTCCTCTGGGATGCCCACTAATTCTTACATGACAGGTGATTGTCTTCATGGAGGGAATCCTGGTGGTGCTTCTTCCATCACTTCGCTATCCGCTCGGTCCCACGATTCATTGGCAGATATGCAATCCCATGAACCCTTTTTTACTAATAACAGCACGCCAAACGTGGCTTATCAAGGGTGGGATGATCATTCATTAGACTCTCTGATTCCTGTAAATGGTGCTGTTGGTGCATCAGGATTACACAGAAACTTGGATTATAGTTTTTGTGGCAATCCCTTAGAAATTAGGCACGAGGGATTCACAAAACCAGTCCAAGATCCCTCACTGAAACCAAATCAAGGATATAATACCATGGACCCCCATAAGGCACAAAGAAGTCGAATCTCTAATAATCTTGGTTCATTGGAGGACCTGGTCAGTGCAATGATGAAACAGGAGCAGGACTTCATATGTGATGATTTCACTGGTGGGGCATCTATGTGA 1947 0.452 MTVETRADEPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALKMLRENKNMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKEKNSTCNQDKPHSGATNNGLGPAGAGNTDQNGKLNKKRKDQDDEDDDEHEHDSDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGIKHLQPLSASGQFQNNVYRSLPYGGMIGRLNSPAGLGVHGLPSSGILQLSHGQNLNNNNNNNNDPLKFQSSMVPVNQNQNGGSLQGMPVSVGIDQLQPKKVVSSVQVPTTGYDDKTVSLISNKLPDPGARVSSSCSRPPLVGIGTNGFLLEPKSQDTHGGRGYENLASVASQQHPEFSMPLMDNHNGRCHDDWPSAVHSSGMPTNSYMTGDCLHGGNPGGASSITSLSARSHDSLADMQSHEPFFTNNSTPNVAYQGWDDHSLDSLIPVNGAVGASGLHRNLDYSFCGNPLEIRHEGFTKPVQDPSLKPNQGYNTMDPHKAQRSRISNNLGSLEDLVSAMMKQEQDFICDDFTGGASM 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1906 648 Gene3D - 17 155 - -
Mibi08g1906 648 MobiDBLite consensus disorder prediction 140 205 - -
Mibi08g1906 648 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Mibi08g1906 648 SUPERFAMILY Homeodomain-like 200 260 IPR009057 -
Mibi08g1906 648 FunFam Two-component response regulator 18 172 - -
Mibi08g1906 648 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 355 IPR045279 GO:0009736
Mibi08g1906 648 Pfam Myb-like DNA-binding domain 205 255 IPR001005 -
Mibi08g1906 648 SMART REC_2 18 130 IPR001789 GO:0000160
Mibi08g1906 648 SUPERFAMILY CheY-like 17 140 IPR011006 -
Mibi08g1906 648 PIRSF RR_ARR_type-B 1 647 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mibi08g1906 648 Gene3D - 199 262 - -
Mibi08g1906 648 MobiDBLite consensus disorder prediction 150 173 - -
Mibi08g1906 648 CDD REC_typeB_ARR-like 20 134 - -
Mibi08g1906 648 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677
Mibi08g1906 648 FunFam Two-component response regulator 199 262 - -
Mibi08g1906 648 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 259 IPR017930 -
Mibi08g1906 648 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1906 Mibi-ChrMibi08 35992551 35995551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1906 1 645 Response Regulator Gene Family AT2G25180 45.000 3.26e-139 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi08g1906 Response_reg 7.4e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1906 08 35992551 35995551 Mibi05g0768 05 7174598 7178447 CCT