Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1902 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTCGTCCTCGACCACCACGACACTACCAGAAATGCTCACTGCCGTATATGGAATGCCTTGTCCGCTTCGACAATACGCCGCATCATTTTCGACGCCGTCAGCTGCGGAGGCGGCTCTCGCCACCACCACCGTGATGACTTCGCCGCCTCGCCGTCACCGATTCCGTCAGACTCCGTTAACTCCAAGGAAAAGTCGCGAGAACAGAGACATAAACCGAATGTGAAGTCGGAGAAGCTATCGGATCTTTTGAATATAGCGGAGTCTGAAACTGACGACGATACGAAGAAGAAGGAAGAGGCATTACAGGAGTTGAAGAGGATTGTGAAGGAGTTACAGGTTGAGGATTTTACGAAGCGGCAAATGGCTGCCGCTAGTGTTAGATTGCTAGCGAAGGAAGATTCGGAAGTTAGAGGGACGTTTGCGATGCTTGGAGCGATTCCTCCTTTGGTTGGAATGCTTGATTTGGAAGATGTCAGTTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAAATGCTGAAGCTCATTGAATCACCAACCGGTCCAGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCGTCTGGTGCAATTCCTTTCCTGTTTAGAACCTTGGAAAATTCACATGAACAAACCAGCCGCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAATCTATCAATCTTCCCAGCCAACATCTCATTCATGTTGGAAACGGATTTGGTTCCGTTTCTGGTAAACTCTATAGGAGACATGGAAGTAAGTGAAAGAATTCTCTCAATCCTAAGCAATTTGGTATCAACCCCTGAGGGTCGAAAAGCTGTAAGTGCTGTGCGAGATGCATTCACCATCCTGGTTGATGTTTTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTTTGATGGTTATGGCACACAAATCCTATGGTGACAGGCAGGCCATGATTGAGGTTGGGATTGTCTCGTCATTGCTTGAGTTGATGCTTCTGGGTACTGCTTTGGCACAGAAAAGGGCTGCAAGAATGTTGGAATGCTTGAGAGTAGACAAAGGGAAGCAGATATCTGGGTGTTCTGGTGGAAACTACAGCTCAACTGTATCTGCTCCCATTTGTGGCTCTTCCTCGTCTTGTACGAAATCAGATGGAAGTAGAAAGGAGTGTTTAGAAGAGGAGGAAGATATGATGAGCGACGAGAAGAAGGCAGTGAAGCAATTAGTTCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTAAAAAGGGCCAATTTACCTCAAGATTTTGTTCCATCCGAGCATTTTAAGACACTCACATCAGGATCCACTTCAAAAAGCCTGCCATTTTGA 1494 0.4592 MAKYHRNNVGSLVLDHHDTTRNAHCRIWNALSASTIRRIIFDAVSCGGGSRHHHRDDFAASPSPIPSDSVNSKEKSREQRHKPNVKSEKLSDLLNIAESETDDDTKKKEEALQELKRIVKELQVEDFTKRQMAAASVRLLAKEDSEVRGTFAMLGAIPPLVGMLDLEDVSSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPTGPDSSVSEAVVANFLGLSALDSNKPIIGSSGAIPFLFRTLENSHEQTSRQAKQDALRALYNLSIFPANISFMLETDLVPFLVNSIGDMEVSERILSILSNLVSTPEGRKAVSAVRDAFTILVDVLNWTDSPGCQEKASYILMVMAHKSYGDRQAMIEVGIVSSLLELMLLGTALAQKRAARMLECLRVDKGKQISGCSGGNYSSTVSAPICGSSSSCTKSDGSRKECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSEHFKTLTSGSTSKSLPF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1902 497 Coils Coil 435 458 - -
Mibi08g1902 497 SUPERFAMILY ARM repeat 114 396 IPR016024 -
Mibi08g1902 497 SMART arm_5 230 274 IPR000225 GO:0005515
Mibi08g1902 497 SMART arm_5 357 398 IPR000225 GO:0005515
Mibi08g1902 497 SMART arm_5 186 229 IPR000225 GO:0005515
Mibi08g1902 497 SMART arm_5 275 313 IPR000225 GO:0005515
Mibi08g1902 497 SMART arm_5 144 184 IPR000225 GO:0005515
Mibi08g1902 497 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 20 497 - -
Mibi08g1902 497 Gene3D - 83 475 IPR011989 -
Mibi08g1902 497 MobiDBLite consensus disorder prediction 71 86 - -
Mibi08g1902 497 Coils Coil 105 125 - -
Mibi08g1902 497 MobiDBLite consensus disorder prediction 51 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1902 Mibi-ChrMibi08 35943120 35945020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1902 133 394 U-box Gene Family AT3G46510 36.940 1.57e-29 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1902 08 35943120 35945020 Mibi05g0773 05 7234133 7235838 CCT