Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1894 ATGATGGAACAGATAAAGCGAGAGATCTCTGTCATGCGTTTAGTTCGACACCCAAACGTTGTTGAACTCAAAGAAGTAATGGCCACCAAAACTAAGATCTTCTTCGTCATGGAATATGTTCGTGGAGGCGAACTCTTCCACAAGGTAGCTAGAGGCAAACTCAAGGAGGATCAAGCACGAAGTTACTTCCAACAGTTAGTCAGAGCCGTTGATTTCTGCCACAGCAGAGGAGTCTCTCACAGAGATCTCAAGCCTGAAAATTTGTTACTTGATGACAAAGGAAATCTTAAAATCTCCGATTTCGGCCTCTCGGCTTTGCCAGAGCAAATCCGACACGACGGTCTCCTCCACACTCAGTGTGGAACTCCGGCGTATGTTGCCCCTGAAGTTTTGAGAAAGAAAGGGTATGAAGGATCGAAAGCTGATATTTGGTCATGTGGTGTGATTCTTTACACATTATTGGCTGGATTCCTTCCGTTTCAACATGAAAACATCATGACTGTGTACACTAAGATCTTCAAAGCTGAGTTCCATTTTCCTCCCTGGTTTTCTGGGGAATCAAAGACACTTATTTCCAAGATTCTCGTGCCAGACCCTGAAATTCGAATCTCAATTCCTGAGATAATGCGTGTCCCCTGGTTTCACAAGGGGTTGTCGATCGTATCCTTAGAGGAACCCACTTTGAATAAAGCCGTTGAGGAAGATTCCAGAACAACCAAGCTTTCATCGCCCAAGTTTTTCAATGCGTTTGAGTTTATTTCTTCCATGTCTTCTGTGTTTGATTTGTCTGGATTGTTCGAGAACAAGAGGAAGATTGGGTCAATGTTCACTTCCAAGCTTCCAGCTAATACTATTATGTTGAAAATCGAGACGATGGCGAAGGAGTTGAGCTTTAAGACAGTAAAAGTGAATGACTTTAAAGTCAAGATGGAAGGTTGGTCGGAAGGGAGGAAAGGGAGGTTGTATGTGACGGCGGAGGTATTGGAGGTGTCGCCGGAAGTCGCCGTCGTGGAGTTTTCAAAGTGTTCCGGTGACACTTTGGAATATGCCAAGTTTTGCGAGGAGGATGTGAGGTCAGCGCTGAAAGACATTGTTTGGACGTGGCAAGGTGACACCACGTGTCACGGTGACATCGGAGATGGTGTGGGACGACAAACGACGAACCAGGTAATGACATAA 1179 0.4512 MMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFHKVARGKLKEDQARSYFQQLVRAVDFCHSRGVSHRDLKPENLLLDDKGNLKISDFGLSALPEQIRHDGLLHTQCGTPAYVAPEVLRKKGYEGSKADIWSCGVILYTLLAGFLPFQHENIMTVYTKIFKAEFHFPPWFSGESKTLISKILVPDPEIRISIPEIMRVPWFHKGLSIVSLEEPTLNKAVEEDSRTTKLSSPKFFNAFEFISSMSSVFDLSGLFENKRKIGSMFTSKLPANTIMLKIETMAKELSFKTVKVNDFKVKMEGWSEGRKGRLYVTAEVLEVSPEVAVVEFSKCSGDTLEYAKFCEEDVRSALKDIVWTWQGDTTCHGDIGDGVGRQTTNQVMT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1894 392 FunFam Non-specific serine/threonine protein kinase 40 221 - -
Mibi08g1894 392 Gene3D Kinase associated domain 1, KA1 242 367 - -
Mibi08g1894 392 CDD CIPK_C 248 362 - -
Mibi08g1894 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Mibi08g1894 392 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1894 392 Gene3D Transferase(Phosphotransferase) domain 1 45 219 - -
Mibi08g1894 392 Pfam Protein kinase domain 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1894 392 SUPERFAMILY Protein kinase-like (PK-like) 2 255 IPR011009 -
Mibi08g1894 392 Pfam NAF domain 244 300 IPR004041 GO:0007165
Mibi08g1894 392 SMART serkin_6 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1894 392 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Mibi08g1894 392 ProSiteProfiles NAF domain profile. 242 267 IPR018451 GO:0007165
Mibi08g1894 392 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 358 - -
Mibi08g1894 392 FunFam Non-specific serine/threonine protein kinase 242 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1894 Mibi-ChrMibi08 35845187 35846365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1894 1 372 CBL-interacting serine-threonine protein kinases AT5G25110 68.930 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi08g1894 Pkinase 1.1e-63 CL0016