Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1892 ATGGATGTAAAGGAAGAAACGATTCAATTGGAGTTGAAACGTGTGAGAGATGAGAATGACACTTTAAAAGTGATGCTTCAAGTTCTGAACAGCAAATACCAAAAGGTTCAGTCGCAACTCGAAGAAATAAGAGGATTGGACTCAATTAATCAAATTGCGTCATCACTCTCTGATTACGATATTACTACCAACAATAAGAGACCAAGAATTGAGTTACCCATAGCTCATAAGCCACTTCAGATCTTCGCCAGAACCCATCCCAAGGACAACAGTATGATAGTGAGAGATGGATATCAGTGGAGGAAGTATGGCCAGAAAGTTACAAAGGATAATCCATCGCCTCGAGCTTACTTCAGATGCTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGATGTGTGCAAGACAGGTCAATCCTAGTAGCAACTTATGAGGGAGAACACAACCATGGGACTGTTGATCCTAAAACCCCCAAAGGCTCAGTTGCCTATGACAAAGAAGGAACCAACTTTAATGATGTTGGGCTTCCTAATTGGATTCTGACGGATACAAGACACAGTACAGAGGATATAAGCAACATCAGAATTGAACAATTTGTGGGATCTCTCATTAAAGATCCCAACTTCACGGTTTCATTAGCCGAAGCAGTTGCACGCTCCATCACCACCCAACAACAACGCAAGCAACAAGGCATTGACCTTAATTTGAGTCTTGCCGAAGTGTAA 732 0.4194 MDVKEETIQLELKRVRDENDTLKVMLQVLNSKYQKVQSQLEEIRGLDSINQIASSLSDYDITTNNKRPRIELPIAHKPLQIFARTHPKDNSMIVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVQDRSILVATYEGEHNHGTVDPKTPKGSVAYDKEGTNFNDVGLPNWILTDTRHSTEDISNIRIEQFVGSLIKDPNFTVSLAEAVARSITTQQQRKQQGIDLNLSLAEV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1892 243 SUPERFAMILY WRKY DNA-binding domain 90 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1892 243 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1892 243 Gene3D WRKY domain 82 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1892 243 ProSiteProfiles WRKY domain profile. 89 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1892 243 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 159 IPR044810 GO:0003700
Mibi08g1892 243 Coils Coil 12 46 - -
Mibi08g1892 243 Pfam WRKY DNA -binding domain 96 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1892 Mibi-ChrMibi08 35770016 35771178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1892 11 219 WRKY Transcription Factor Family AT1G80840 35.294 2.60e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g1892 WRKY 9.7e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1892 08 35770016 35771178 Mibi05g0777 05 7296279 7297657 CCT