Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1879 ATGAACACACATCCTGAAATTCACCAAAGTCCAATAAGAGGCCCTACAGGGCAAACACAAATGGGAATATATCTAAGCAGTCCCAGAACTGAGAAGTCTTCTGAAGATGGTGAGAATGACCATCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCAGACCTTGATGCGTCCACTTCGTTTTTTGGTGTTTATGATGGGCATGGAGGTAAGGTGGTTGCGAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGCTCAAAAGCGAAGCATATACTGCGGGAGATATAGGAACCTCTCTTCAGAAAGCTTTTTTTAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCTATCTTAGGTGATAAGTTTAATAAGTTTACTGGGATGATAGAAGGATTGATTTGGTCTCCACGGAGCAGTGATGGCAATGACAAGGCTGATGATTGGGCTTTTGAGGAGGGACCTCATTCTGATTTTACTGGACCTACTTCAGGAAGCACCGCCTGTGTTGCAGTTATTAGACACAACCTACTTGTCGTTGCAAATGCTGGGGATTCAAGATGTGTGATATCTAGGAAGGGTCAGGCGTACAATTTATCGAGGGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATACATGCAGGGCGAGTTAATGGCAGCTTAAATCTTGCAAGAGCTATAGGTGACATGGAGTTTAAACAAAATAAATTTCTGTCTGCTGATAAACAAATCGTGACGGCCAATCCCGATATAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTTTAGTGCTAGCATGTGATGGGATATGGGATTGCTTATCAAGCCAGCAATTGGTAGATTATGTGCATGAACAACTGCTCTCTGAAACGAAACTCTCAACTGTATGTGAGAGAGTACTTGATCGGTGTTTGGCACCATCAACCGCTAGAGGTGAGGGATGTGATAACATGACAATGATCTTGGTTCAGTTTAAGAAACCCACCCGGTCTAATGAAGAAGCTGCAGAGGAATTCACTTCAAACGAACAAGCTGAATCTGAACCAAAACCAGAGGAAAGCCAAATTTAA 1143 0.4278 MNTHPEIHQSPIRGPTGQTQMGIYLSSPRTEKSSEDGENDHLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYTAGDIGTSLQKAFFRMDEMMRGQRGWRELAILGDKFNKFTGMIEGLIWSPRSSDGNDKADDWAFEEGPHSDFTGPTSGSTACVAVIRHNLLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSADKQIVTANPDINTVELCDEDEFLVLACDGIWDCLSSQQLVDYVHEQLLSETKLSTVCERVLDRCLAPSTARGEGCDNMTMILVQFKKPTRSNEEAAEEFTSNEQAESEPKPEESQI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1879 380 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Mibi08g1879 380 Gene3D - 20 350 IPR036457 -
Mibi08g1879 380 CDD PP2Cc 43 349 IPR001932 -
Mibi08g1879 380 MobiDBLite consensus disorder prediction 354 380 - -
Mibi08g1879 380 SUPERFAMILY PP2C-like 23 351 IPR036457 -
Mibi08g1879 380 Pfam Protein phosphatase 2C 43 123 IPR001932 -
Mibi08g1879 380 Pfam Protein phosphatase 2C 162 333 IPR001932 -
Mibi08g1879 380 SMART PP2C_4 33 347 IPR001932 -
Mibi08g1879 380 SMART PP2C_SIG_2 48 349 IPR001932 -
Mibi08g1879 380 MobiDBLite consensus disorder prediction 1 22 - -
Mibi08g1879 380 ProSiteProfiles PPM-type phosphatase domain profile. 43 349 IPR001932 -
Mibi08g1879 380 PANTHER PROTEIN PHOSPHATASE 2C 32 348 IPR015655 GO:0004722|GO:0006470
Mibi08g1879 380 MobiDBLite consensus disorder prediction 352 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1879 Mibi-ChrMibi08 35646240 35652659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1879 21 358 PP2C-type Phosphatase Gene Family AT2G25070 79.586 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1879 08 35646240 35652659 Mibi08g1879 08 35646240 35652659 ECH