Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1866 ATGAAGAAGCTGACCGTCTTGTTCATATGGGCTTTATGTTGTTCCCTAAGCAGCATCGCACAGACAAATGAAAACGTGACAGTAAAAATAGGAATCGTACTTGATCTTTCTTCTCCAGCCGCAAACATTGGCTTCAGCTGTATCAACATGTCCCTTTCTGACTTTTATGTATCTCATTCTCATTACAAAACCAGGCTCGTCTTCATCCTCAGGGATTCCCACTCAGATGTTGTTTCTGCAGCTTCTCAAGGTCTAGATCTCATAGAGTCGGAGAAAGTAGAAGCCATAATAGGTCCATTCACGTCGATGGAGGCCATCTTTTTGATCAGTCTGGGAGACAAAGCTCATGTTCCCATTATAACCTTTTCAGCAACAAGTCCTTCTCTTGCTTCCATTCCTAGTTTATATTTTTTTCGAATTGCACAAACTGATTCAGCTCAAGTGAAAGCCATTGGAGCGATAGTACAAGCTTTTGGGTGGAAAGAAGCAGTACCCATTTACACAGACAACGAATATGGAAAAGGGGTCATACCCTTCTTGACTAATTCTCTTCAACAAGTGTACGTTAGAATCCCATATCAGAGTTCTATTTCACCTTCAGCCACTGATGAAGATATCAGAGCAGAGCTATACAAGATAATGACAATGCAAACCAGAGTGTTTGTTGTGCACATGACTCCAGATTCGGGCGTGAGACTTTTCACCATTGCAAAACAGATTGGAATGAAGAGCAAAGGTTATGTTTGGATCGTAACAGATGGCTTAGCCAATGAATTAAACTCTTTGAATTCCTCAGTCATAGAGTCAATGGAAGGAGTTTTGGGAGTGAGGACTTATATCCCCCAAACGGAGCAGTTAGATGAGTTTAGAGTTCGATGGAAAAGAAGATTCCTACGGGAAAATCCTACCCTTGTTGATACTGATTTGAATGTTTTTGGAGTATGGGCTTACGATGCTGTTACAGCATTAGCTATGGCTGTTGAGAAAGTTGATACCAACAATCTTGGGTTTGCTAAGAGCAATGACACTTCGTCCAATTCAACTGATTTGGAAAGGATTGGAGTTTCAAAAATTGGTGAAAATCTGCGTGCAGCCTTATTAAACACTACATTTACAGGTCTCAGTGGAGAATTCAGGATTGTCAATAGGCAATTACAAGCTTCAACGTTTGAGATATTGAATGTGATTGGGAGTGGAGGAAGAACGATTGGGTTTTGGACACCACAAAATGGAATAGTCAGAAATCTGAACGCAATTAACAGCAAAATGTATTCTGCATCAAGTAAGGATCTTGGTTCAATTATATGGCCAGGTGACACGAACTCTATTCCAAAGGGTTGGGAAATTCCCACAAATGCGAAGAAGTTAAGGATAGGGGTGCCCACCAAAAATGGTTATCCTCAATTTGTGAAAATATCTTATGATCCCATCACTAATACAACTGATGTCACTGGATTTTGTATTGATGTGTTCAAAGCAGTGTTGGAAGTTCTCCCTTATGCCTTACCCTATGAATTTATTCCTTTTGCTAAACCAAATGGCGAGAGTGCAGGATCATACAACGAGCTCATCAGCCAGGTTTATTTTGGGAATTTTGATGCCGTGGTGGGGGATGTAACCATTATAGCAAACAGGTCCATTTATGTGGATTTCACCTTGCCTTACACTGAATCTGGTGTAACAATGGTGGTTCCAGTAAAAGACCAGAGGAAGAAGAATGCATGGGCCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTGACAAGTGCTTGCTCATTTGTGTTCATTGGGTTTGTTGTATGGGTGCTTGAACACAGAATAAACGAACATTTCAGAGGGCCTCCATTTCACCAAATTGGAACAAGCTTATGGTTTTCATTCTCCACCATGGTTTTTGCACATAGAGAAAAAGTGGTGAGCAACTTGAGTAGATTTGTGGTGATTATATGGGTTTTTGTGGTTCTAATTCTAGTTCAAAGCTATACTGCTAGTCTAACGGCACTTTTGACGGTTGATCAGCTCAGCCCAACTGTAACTGACGTTAACTTACTGATAAGTAAGAGAATGAATGTTGGTTACAAGCAAGGTTCTTTTGTGCTTGAAATCTTGAAGGAAATGGGCTTCCTTGATTACCAACTTAAAACATATGCATCCATAGAGGAATGCAACGAACTCTTCGAAAGAGGAAGTGCGAATGGTGGCATTGCAGCTGCATTTGATGAGGTACCATACGTTGTCAAAGTCTTTCTTCAGAGTTATTGTTCTAAGTATGCCATGGTTGAGCCAACTTTACAAACTGGCGGCTTTGGATTTGTATTTCCTAAAGGTTCTCCTCTTGTGGGTGACATTTCAAGGGCAATCCTGAATGTTACACAAGGAGATAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAGGAAATAACTGTCCAAATTCTGATACCTCAATTTCATCAAACAGTTTAGGACTTGAAAGCTTCTGGGGACTATTTCTCATTGTAGGGGTTGCTTCTGCTTTAGCTCTTATTGTCTTCGTCGTTAGCTTCCTATATCAGAACAAACAAATATGGTCACACTATGATTCCAATACCTCAAAGTGGAGACGAATCAGGAAGCTGATAAAGATTTTCGACCAGAGGGACATGAGTTCTCATACCTTCAGAAAAAGGGAAGTGCAGGAGAAGAGTGAAAATTATAGCACACGTGATATATGTGAAGTTGAGGCAACTCCGCGTTCAAACTGCCCCCCAAGTCCATCTGAATATGAATCAAGATTCTCGTCTTATAGTGAGGCTAGCCCATATAGGCCAGCACCACAACACACAGAAATAACTTTAGTTCATGCTATAATATAG 2853 0.4062 MKKLTVLFIWALCCSLSSIAQTNENVTVKIGIVLDLSSPAANIGFSCINMSLSDFYVSHSHYKTRLVFILRDSHSDVVSAASQGLDLIESEKVEAIIGPFTSMEAIFLISLGDKAHVPIITFSATSPSLASIPSLYFFRIAQTDSAQVKAIGAIVQAFGWKEAVPIYTDNEYGKGVIPFLTNSLQQVYVRIPYQSSISPSATDEDIRAELYKIMTMQTRVFVVHMTPDSGVRLFTIAKQIGMKSKGYVWIVTDGLANELNSLNSSVIESMEGVLGVRTYIPQTEQLDEFRVRWKRRFLRENPTLVDTDLNVFGVWAYDAVTALAMAVEKVDTNNLGFAKSNDTSSNSTDLERIGVSKIGENLRAALLNTTFTGLSGEFRIVNRQLQASTFEILNVIGSGGRTIGFWTPQNGIVRNLNAINSKMYSASSKDLGSIIWPGDTNSIPKGWEIPTNAKKLRIGVPTKNGYPQFVKISYDPITNTTDVTGFCIDVFKAVLEVLPYALPYEFIPFAKPNGESAGSYNELISQVYFGNFDAVVGDVTIIANRSIYVDFTLPYTESGVTMVVPVKDQRKKNAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEHRINEHFRGPPFHQIGTSLWFSFSTMVFAHREKVVSNLSRFVVIIWVFVVLILVQSYTASLTALLTVDQLSPTVTDVNLLISKRMNVGYKQGSFVLEILKEMGFLDYQLKTYASIEECNELFERGSANGGIAAAFDEVPYVVKVFLQSYCSKYAMVEPTLQTGGFGFVFPKGSPLVGDISRAILNVTQGDKMKVIENAWFRGNNCPNSDTSISSNSLGLESFWGLFLIVGVASALALIVFVVSFLYQNKQIWSHYDSNTSKWRRIRKLIKIFDQRDMSSHTFRKREVQEKSENYSTRDICEVEATPRSNCPPSPSEYESRFSSYSEASPYRPAPQHTEITLVHAII 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1866 950 Gene3D - 456 573 - -
Mibi08g1866 950 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 877 - -
Mibi08g1866 950 Gene3D - 574 704 - -
Mibi08g1866 950 PIRSF IGluLR_plant 1 940 IPR017103 -
Mibi08g1866 950 Gene3D - 353 455 - -
Mibi08g1866 950 FunFam Glutamate receptor 318 454 - -
Mibi08g1866 950 FunFam Glutamate receptor 2.7 711 811 - -
Mibi08g1866 950 Gene3D - 145 309 - -
Mibi08g1866 950 FunFam Glutamate receptor 455 574 - -
Mibi08g1866 950 SUPERFAMILY Periplasmic binding protein-like I 27 448 IPR028082 -
Mibi08g1866 950 FunFam Glutamate receptor 574 704 - -
Mibi08g1866 950 Pfam Ligand-gated ion channel 806 836 IPR001320 GO:0015276|GO:0016020
Mibi08g1866 950 CDD PBP1_GABAb_receptor_plant 29 416 IPR044440 -
Mibi08g1866 950 Pfam Receptor family ligand binding region 48 397 IPR001828 -
Mibi08g1866 950 SMART GluR_14 457 806 IPR001320 GO:0015276|GO:0016020
Mibi08g1866 950 SUPERFAMILY Periplasmic binding protein-like II 433 806 - -
Mibi08g1866 950 FunFam Glutamate receptor 149 307 - -
Mibi08g1866 950 CDD GluR_Plant 454 804 - -
Mibi08g1866 950 Pfam Bacterial extracellular solute-binding proteins, family 3 480 805 IPR001638 -
Mibi08g1866 950 Gene3D - 752 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1866 Mibi-ChrMibi08 35547793 35552691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1866 6 942 Ion Channels AT2G29120 51.055 0.0 946