Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1865 ATGATGAAGAAGCTCACTTGCTTTCTACTCTTCCTTTTCTGTACTCTTGCTTGTTCCCTGCGTATATCCTTATCTCAGACAAACGCAACTGTTCCGGTGAAAGTTGGAATCATCCTTGATCTTTCTTCTTCCACCGCCAAGATGGGCTTGAGCAGCATCTACATGTCCCTCTCTGACTTTTACATCTCTCATTCTCATTACAAAACCAGACTCATCTTTACCCTCAGGAACTCCAAAAGAGACATCGTTATTACTGCTTCTCAAGCTATAGATCTCATAAAAACAGAGCAAGTTCATGCCATTATAGGACCATCAACATCTATGGAGGCCAACTTTGTGATCAGTCTTGGAACAGAAACTCACGTGCCCATCATAACTTTCTCTGCAACGAGTCCTTCTCTTAATTCTCTTGGCAGCCCATACTTCTTTCAAATTGCACAGAACGATTCTGCTCAAGTGAATGCCATTAGCTCAATCGTGCAAGCTTTTGGGTGGAAAGAGGTTGTTCCTATTTACCTCGACAACGACTTTGGGAAAGGGGTCACACCCTTCTTAATTAATTCTCTCCAACAAGTTTATGTTCGAATCCCATATATGAGTGCCATTTCATCTTCAGCCACGGATGAAGAAATCAAAATAGAGCTTTCCAAATTGATGCGCAATCAAACCAGAGTGTTTGTTGTGCATGTGACTTCTGATTTTGGCACTCGTCTCTTCTCCATAGCAAAACATATTGGTATGATGAGCAGAGGCTATGTTTGGATCGTAACCGATGGTTTGGGTAATATGCTGAATTCCCTCGACTCCTCGGTGTTAGAATCAATGCAAGGAGTATTGGGTGTTAAGAGTTATATTTCCAAAACGAGAGAGTTTGATGCTTTTGAAGTGAGATGGAAAAGAAAGTTCATACAAGACAATCCAACCCTTTCTGGTATTAATCTGAATGCGTTTGGATTATGGGCTTATGATGCTACCACGGCTTTAGCCATGGCAGTTGAACAAGTAGGCAAGGGAAATCTCGGCTTCGATGTGAGTAAAGCTTCAGGCAATTCTTCAGATCTTGAAAGCTTAGGAGTTTCAAGAAGTGGTGAAAAGCTGCGAGAGGCCATATCCAGAATCAAATTTAGAGGACTAAATGGAGAGTTCAGTGTTGTTAATGGACAATTACCAGCATCAGCTTTTGAGATAGTAAATGTGGTAGGTAACGGTCAAAGAACAATAGGATTTTGGACAGCACAAAATGGACTTGTTCGAAATCTGAGTTCGATGAACATAAGCACATATTCTACATCAAAGAAGGATCTTGGAGAAGTAATATGGCCAGGGGATACAAAATCCATTCCAAAGGGTTGGGAAATCCCTGTGAAAGGAACAAAGTTGAGGGTAGGTGTGCCAGTGAAAGCAGGTTTTACTGAATTCGTGAAGGCAACACTAAATCAAACCACAAATAAACCAGAAATCACAGGATTCTGCATCGACATGTTCAAGGCTGTGGTGGAAGCATTACCGTATCCCCTGTTATATGACTTCATCCCATATCCTAAGATGGAAGCTGTGATTAGTACAACTCCAATATACGACGACCTTATCAGCCAAGTTTATTTCGGGAACTTTGATGCGGTGGTAGCGGATGTGACAATTATAGCAAACAGGTCGAACTATGTGGATTTCACTTTGCCATACACAGAATCCGGTGTGACAATGATAGTTCCAGTGAAAGAAGAGAGGGAGAAGAATGCATGGGCCTTCTTAAAGCCGCTGACTTGGGATCTCTGGGTGACAAGTGCTTGTTCCTTTGTATTTATTGGGTTCGTTGTGTGGGTTCTTGAACATCGGATAAATAAACATTTCAGAGGACCTCCCTCCCATCAAATTGGTACCAGCTTATGGTTTTCTTTCTCAATCATGGTTTTTGCCCATCGGGAGAGAGTGGTGAGCAATTTGAGTAGATTTGTGGTGATTGTATGGATATTTGTGGTTCTAATTCTGATTCAGAGTTATACTGCAAGTTTGACTTCGCTCATGACGGTTGAACGGCTTGCACCTAGTGTAACAGACGTCAATCTGCTCCTAAAGAATAGATTGAATGTTGGTTATTTGGAAGGTTCTTTTGTACATGGAGTTTTGAAGGATATGGGTTTTCAAGATTACCAACTCAAGATTTATAATTCCACTGAAAGTTGCCACAAACTATTTGAAAAAGGAGTTGAAAATGGTGGAATTGCAGCTGCGTTTGACGAAATTCCATATGTGAAACTCTTTCTTGGGAAGTACTGCTCCAAGTACACCATGGTTGATCCTACTTTCAAAACAGGAGGCTTTGGCTTTGTATTTTCAAGAGGTTCTCCTCTTGTAGCAGACATTTCAAGAGGAATACTGAACGTGACACAAGGGAATAAAATAAAAACAATAGAGAGTAAATGGTTCAATGGAAGTAATTGCCCAGATTCGACATCCTTAGTTTCTTCAAATAATAGCCTAGGCCTTGAAAGCTTCTGGGGCCTATTTCTAATTGCAGGGGTTGCATCTATATTAGCACTCATAATCTTCTCAGTCACATTTCTATACCAGAACAGAAACATAATCTGGTCACGCTATGATAATGCCGATGATAATACATCACTATGGAGGAGAATAAAGATGTTGGTGAGGATTTTTAACCAAAGAGACGAAAGTTCTCACACATTCAAGAAAAAGGAAATGGGAGATGATGGTGATGGAGGTAGTCATAATCATGCAGAGTTGGGTTTGGGAGCGGTGGAGGCTTCTCCAACATCACAGTGTCCACCAAGTCCATCAAGTGAAGGTGATGATGAATCTGAGTTTTCCTTTAATGGAGATGGTGGAGTGTTATCTCAGGAGTTTGGTGGGGCTAATAATAATCCAAATGCCTTTCTGCCTCAGAACGTAGAAATAACCATCAGCCATTGGGTGCAGCCTGCTTAA 2946 0.4114 MMKKLTCFLLFLFCTLACSLRISLSQTNATVPVKVGIILDLSSSTAKMGLSSIYMSLSDFYISHSHYKTRLIFTLRNSKRDIVITASQAIDLIKTEQVHAIIGPSTSMEANFVISLGTETHVPIITFSATSPSLNSLGSPYFFQIAQNDSAQVNAISSIVQAFGWKEVVPIYLDNDFGKGVTPFLINSLQQVYVRIPYMSAISSSATDEEIKIELSKLMRNQTRVFVVHVTSDFGTRLFSIAKHIGMMSRGYVWIVTDGLGNMLNSLDSSVLESMQGVLGVKSYISKTREFDAFEVRWKRKFIQDNPTLSGINLNAFGLWAYDATTALAMAVEQVGKGNLGFDVSKASGNSSDLESLGVSRSGEKLREAISRIKFRGLNGEFSVVNGQLPASAFEIVNVVGNGQRTIGFWTAQNGLVRNLSSMNISTYSTSKKDLGEVIWPGDTKSIPKGWEIPVKGTKLRVGVPVKAGFTEFVKATLNQTTNKPEITGFCIDMFKAVVEALPYPLLYDFIPYPKMEAVISTTPIYDDLISQVYFGNFDAVVADVTIIANRSNYVDFTLPYTESGVTMIVPVKEEREKNAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEHRINKHFRGPPSHQIGTSLWFSFSIMVFAHRERVVSNLSRFVVIVWIFVVLILIQSYTASLTSLMTVERLAPSVTDVNLLLKNRLNVGYLEGSFVHGVLKDMGFQDYQLKIYNSTESCHKLFEKGVENGGIAAAFDEIPYVKLFLGKYCSKYTMVDPTFKTGGFGFVFSRGSPLVADISRGILNVTQGNKIKTIESKWFNGSNCPDSTSLVSSNNSLGLESFWGLFLIAGVASILALIIFSVTFLYQNRNIIWSRYDNADDNTSLWRRIKMLVRIFNQRDESSHTFKKKEMGDDGDGGSHNHAELGLGAVEASPTSQCPPSPSSEGDDESEFSFNGDGGVLSQEFGGANNNPNAFLPQNVEITISHWVQPA 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1865 981 FunFam Glutamate receptor 2.7 717 816 - -
Mibi08g1865 981 FunFam Glutamate receptor 580 710 - -
Mibi08g1865 981 SUPERFAMILY Periplasmic binding protein-like I 33 452 IPR028082 -
Mibi08g1865 981 CDD GluR_Plant 459 809 - -
Mibi08g1865 981 Gene3D - 460 580 - -
Mibi08g1865 981 Pfam Ligand-gated ion channel 811 842 IPR001320 GO:0015276|GO:0016020
Mibi08g1865 981 FunFam Glutamate receptor 323 458 - -
Mibi08g1865 981 PIRSF IGluLR_plant 1 938 IPR017103 -
Mibi08g1865 981 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 889 - -
Mibi08g1865 981 Gene3D - 757 816 - -
Mibi08g1865 981 FunFam Glutamate receptor 148 302 - -
Mibi08g1865 981 Pfam Bacterial extracellular solute-binding proteins, family 3 484 810 IPR001638 -
Mibi08g1865 981 MobiDBLite consensus disorder prediction 894 964 - -
Mibi08g1865 981 MobiDBLite consensus disorder prediction 894 910 - -
Mibi08g1865 981 FunFam Glutamate receptor 459 580 - -
Mibi08g1865 981 SUPERFAMILY Periplasmic binding protein-like II 438 811 - -
Mibi08g1865 981 Gene3D - 581 708 - -
Mibi08g1865 981 MobiDBLite consensus disorder prediction 924 939 - -
Mibi08g1865 981 CDD PBP1_GABAb_receptor_plant 34 420 IPR044440 -
Mibi08g1865 981 SMART GluR_14 459 811 IPR001320 GO:0015276|GO:0016020
Mibi08g1865 981 Gene3D - 150 314 - -
Mibi08g1865 981 Gene3D - 361 459 - -
Mibi08g1865 981 Pfam Receptor family ligand binding region 52 401 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1865 Mibi-ChrMibi08 35539989 35543302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1865 3 934 Ion Channels AT2G29120 50.000 0.0 892