Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1864 ATGAAGGAGAAGAGGGTTGCCAAAGTTGTGGAAGCGATGCTCTTTTATTGCTCTGTGATTCTGTGTTTGAAGATGAGTGACTCATCACAGAGCAACAATACATCAAGGGTAATGCAGGTGAAAGTGGGGCTTCTTCTTGATCTTTCGCAAACAACTGGGAAGATCGGATTCAGCTGTATCAACATGTCTCTCTCTGACTTTTATGCCTCTCGTTCTCATTACAAAACAAGGCTCCTCCTCCATGTCAGAGATTCCCGAACACGTGTCATCACTGCAGCTTCCCAAGCAATAGAGCTCTTAAAAGTAGAGAAAGTGCAAGCCATAATTGGACCCTTTACGTCAATGGAAGCTAACTTTGTGATAAGTCTCGGAGACAAAGCTCACGTGCCCATCTTAACATTTTCAGCAACTAGTCCTTCTCTTGCTTCCCTTCGTAGTCCATATTTCTTCCGCGTCGCACAAAACGATTCATCTCAAGTCAACGCCATTGCTTCAATCGTACAAGCTTTTGGGTGGAAAAAAGCAGTTCCCATTTACATAGACAACGATTATGGCAAAGGTATCATACCCTTTTTGACAAATTCTCTTCAACAAGTCTCTGTTCAAATCCCATATCTTAGTGCCATTTCTCCTTCAGCCAAAGATGAAGAAATCAGAGCAGAGCTTTATAAGTTAATGACAATGCAAACCAGAGTTTTCGTTGTTCACATGACACCAAACCATGGAACTAGTTTCTTCAGAGTAGCACATGAGATTGGTATGATGAAAGAAGGGAATGTTTGGATCGTCACCGATGGTTTGGGCAATGAGGTGAATTCTCTGGCCTTCTCAGCGATAGAATCAATGCAAGGAGTAATTGGTGTGAGGACTTATGTTCCCAAAACAAAACGGCTTGATGATTTTAAAGTTCGATGGAGAAGAAAATTCATACAGGACAATCCTACCCTTGTTGATGTAGATTTGAATGTTTTTGGAAAATGGGCTTATGATTCAGCCACAGCACTAGCCATGGCTGTTGAGAAGGCTGGCACTAAGAATCTTGGATTTGATGATACGAGCAATAGTAATGATTCGGGTAATTTTTCTGATCTTGAAAAGTTGGGAGTTTCACAGAATGGGGAAAATCTGCGAGAGGCCTTGTCAGAAACTAGATTTAGTGGCATCAGTGGAGAGTTCAGTGTTATTGACGGGCAATTAGAAGCATCCACATTTGAGATTATCAACATTAATGGTAATGGAGAGAGACTAGTAGGATTTTGGACACCAGAAAAAGGAATAACAAGGGACCTGAAATTCACTAGCACAATCACAACATATTCTACTAGTAGGAATAATCTGAAGCCTATCATATGGCCAGGGGATACTTCCTCTGTTCCAAAGGGTTGGGAAAATCCTACAAGTGAGAAAAAAATTAGGATAGGAGTTCCAGTGAAAAGGGGTTTTACTGAATTTGTGATGGTAGCAAATGATCGTAGCACCAATACAACAGATGTCACTGGATTCAGCATAGACGTATTCAAGGCAGTTCTTGAAGTTTTGCCTTATGCAGTGCCTTATGAATTTGTCCCATTTGCAAAGCCGGATGGAGAATCTGCAGGAACATACGATGAGCTCATCAACCAAGTTTCTTATGGGAATCTTGATGCTGTTGTTGGGGATACGACGATTACTGCAAAGAGGTCGAGTGAGGTGGAATTCACTGTGCCATACACAGAATCTGGTGGAACTATGATTGTTCTATTAGTAGAAAATAAGCACAAGAGTCCATGGGCTTTCTTAAAGCCATTGACTTGGGATCTGTGGGTAACCACTGCTTTTTTCTTCATATTTGTTGCCTTCGTTGTATGGATTCTCGAACATCGAATAAACGATTCATTCCGTGGACCTCCCTCACATCAGATTGGCACCAGCTTATGGTTTTCATTCTCAACCTTGGTCTTCGCCCATAGGGAGAAACTAGTGAGCAATTGTGCTAGATTTGTGGTGATAATGTGGGTATTCGTGGTTCTAATTTTGATCCAAAGCTACACGGCAAGTTTGACTTCACTCTTGACTGTTCAGAAGCTGCGTCCAAGTTTTACAGATGTGAATAAATTGATAGAAAATAAGCTGAATGTGGGGTACCACAGTGGTTCTTTTGTGTATGGGATGTTAAAGGATATGGGATTTCAAGATTCCCAACTCATTCCTTATGTCTCCGCAGAACAATGTAACGACTTGTTTACACTAGGAAGTGCCAAAGGTGGCATTGACGCTGCTTTTGATGAGCTTCCCAATGTTAAGCTCTTTCTCGCAACTTACTGCTCCAAGTATACTTCCACAGTTCCACATACCTTCAGAACTGATGGCTATGGTTATGTGTTTCCTAAAGGGTCTTCTCTAGTAGCAGACATTTCAAGGGGAATCCTGAATGTAACTCAGGGAGATAAGATGAAAACAATAGAGAGCGCGTGGTTCAAGAGAAATCATTGTGCAGAGAATGATGCTTCAGTTTCATCTGATAATCTTAGCCTAGATAGTTTCTGGGGACTCTTCTTCATTGCAGGACTTGCTTCCGTTTCAGCTCTCTTCATATTTGCTGTCAGATTTCTATATCAGCACAAGCATATCTGGAATTCCAATCCATCTAACTCAACATCATCATCGATATGGAAACGAATCAGGGCGTTGCTTAAAGTATTTGATGAAAAAGACTTGAGCTCCCACACTTTCAGAAATAGTGAACGTAAAAGTTCAGCTCATAATGGATCATCTCCTCCAAGTACTCACTTCCCAACAAGTCCTTCATCGTTTTCAGTAGAACATGGAAACGTTAATAATGGGGATGCACCTCAAGACATAGAGATGAGCGTGGCGTTTAATTCCCCACCTTCACCCTCACCAGTTGCTAGTCCTTCAAACAATTGA 2907 0.4145 MKEKRVAKVVEAMLFYCSVILCLKMSDSSQSNNTSRVMQVKVGLLLDLSQTTGKIGFSCINMSLSDFYASRSHYKTRLLLHVRDSRTRVITAASQAIELLKVEKVQAIIGPFTSMEANFVISLGDKAHVPILTFSATSPSLASLRSPYFFRVAQNDSSQVNAIASIVQAFGWKKAVPIYIDNDYGKGIIPFLTNSLQQVSVQIPYLSAISPSAKDEEIRAELYKLMTMQTRVFVVHMTPNHGTSFFRVAHEIGMMKEGNVWIVTDGLGNEVNSLAFSAIESMQGVIGVRTYVPKTKRLDDFKVRWRRKFIQDNPTLVDVDLNVFGKWAYDSATALAMAVEKAGTKNLGFDDTSNSNDSGNFSDLEKLGVSQNGENLREALSETRFSGISGEFSVIDGQLEASTFEIININGNGERLVGFWTPEKGITRDLKFTSTITTYSTSRNNLKPIIWPGDTSSVPKGWENPTSEKKIRIGVPVKRGFTEFVMVANDRSTNTTDVTGFSIDVFKAVLEVLPYAVPYEFVPFAKPDGESAGTYDELINQVSYGNLDAVVGDTTITAKRSSEVEFTVPYTESGGTMIVLLVENKHKSPWAFLKPLTWDLWVTTAFFFIFVAFVVWILEHRINDSFRGPPSHQIGTSLWFSFSTLVFAHREKLVSNCARFVVIMWVFVVLILIQSYTASLTSLLTVQKLRPSFTDVNKLIENKLNVGYHSGSFVYGMLKDMGFQDSQLIPYVSAEQCNDLFTLGSAKGGIDAAFDELPNVKLFLATYCSKYTSTVPHTFRTDGYGYVFPKGSSLVADISRGILNVTQGDKMKTIESAWFKRNHCAENDASVSSDNLSLDSFWGLFFIAGLASVSALFIFAVRFLYQHKHIWNSNPSNSTSSSIWKRIRALLKVFDEKDLSSHTFRNSERKSSAHNGSSPPSTHFPTSPSSFSVEHGNVNNGDAPQDIEMSVAFNSPPSPSPVASPSNN 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1864 968 SUPERFAMILY Periplasmic binding protein-like I 40 453 IPR028082 -
Mibi08g1864 968 SUPERFAMILY Periplasmic binding protein-like II 449 822 - -
Mibi08g1864 968 FunFam Glutamate receptor 159 318 - -
Mibi08g1864 968 PIRSF IGluLR_plant 6 951 IPR017103 -
Mibi08g1864 968 Gene3D - 750 826 - -
Mibi08g1864 968 Gene3D - 369 469 - -
Mibi08g1864 968 MobiDBLite consensus disorder prediction 910 939 - -
Mibi08g1864 968 FunFam Glutamate receptor 589 719 - -
Mibi08g1864 968 Pfam Ligand-gated ion channel 821 851 IPR001320 GO:0015276|GO:0016020
Mibi08g1864 968 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 883 - -
Mibi08g1864 968 Pfam Bacterial extracellular solute-binding proteins, family 3 495 820 IPR001638 -
Mibi08g1864 968 Gene3D - 589 718 - -
Mibi08g1864 968 SMART GluR_14 472 821 IPR001320 GO:0015276|GO:0016020
Mibi08g1864 968 FunFam Glutamate receptor 369 469 - -
Mibi08g1864 968 Gene3D - 470 588 - -
Mibi08g1864 968 CDD PBP1_GABAb_receptor_plant 41 430 IPR044440 -
Mibi08g1864 968 FunFam Glutamate receptor 470 589 - -
Mibi08g1864 968 MobiDBLite consensus disorder prediction 904 968 - -
Mibi08g1864 968 Pfam Receptor family ligand binding region 60 412 IPR001828 -
Mibi08g1864 968 Gene3D - 157 321 - -
Mibi08g1864 968 CDD GluR_Plant 469 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1864 Mibi-ChrMibi08 35528142 35534286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1864 13 931 Ion Channels AT2G29120 49.678 0.0 880