Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1863 ATGGAGCATGACCTTATGGAGGACATGGACATAGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGGAACTGATGCTGGGAAACAGTTTAACATAGAGAAGCCAGGAAATGACATGTTGGAGGAAGTCACAATAGTGGAGGAGCCAAGTATAGTTGATTTCAAGCGTCTCATGGAGCTCACAAACTATACAGATAGAGGGTCAACTCAGTTGACTTATTTCATGAAATACTTGGAGTACAAGCAGGCTAATGCCGTGCGTCTCCTGCGAGAAGAACTCGACAATTTAAGCAAACAAAGACAGGAGGTTGAGCTGAGGAAATTGAAGATATTGGAAGAACACAGATTTGAGGACATAAGATATGGGGATGACAAAAGACCAGTTTCTATATTGGATGAAGTTTATGACGTATGGCAAGATAGGCCTCGGAGGAAACATAATGCTGTTGTTCAGAACAAAGGTATTGAAATAGATGCTGAGTATGATACTGTGGTGTACTGGAAGAAGAGGGCATTACATTTGGAAAAATTGTTGGAGGCAAGTATACAGAGAGAGCATACGCTTATGGAGAAGCTGGAAGAAAGCATAAAGGATATTGAGAGGCAGTCCACTCCTGTAGAAGAATTGTCCCAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGATTGGGAGAGGAGGACATCATTGGAAAAACAGATGTGGAAATTTTCACAGGGTCTGGAGTTAAGGAATCTCAAGATTTTAAGAGAGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATAACTTTTGAGACAGAACTATTTGGGTCAAAGACATTCTTAATTTATGTAGAACCTGTCTTCAGCAAGGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGACCAGGTGAGAAAAAGAGAAAGAATGGCACAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAGCAAGACCATTCACATTACAGAGGAGACAATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCCCCGCTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTACTACAAAACTTGACAGGGAGCAAAGACAGCTTTTGGAAGTCATGCTTTCCTCTGGAGATTTGGTTCTTCAACTTATAAATGACATATTAGATCTTTCCAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCAACCAAATTCCGTCCAAGAGAGGTAGTGAAGCATGTGCTGCAGACTGCTGCTGCATCACTGCAGAAAATATTAACCCTAGAAGGTCATGTGGCAGATGATGTACCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATTCTCACAAATCTCATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTCCACGTTGTAGCTCAGCCCAATTCTGGAAAACCGGAAGAAGTTCTCCAAAAGATGAGTGGAGACAAGTCAAATGTACCAGTGAGTGGACTGACAGAAGAGAAATACTTCTCATCAGCGTCTCAAAGTGGGAGTGATGAATGTAGATCCCCAGTTAAAAGCGAATGCTCAAGGAATGGGGATACAGAGGAGCAACACCATTCAACTGAAACTACAGTTTGGATACGTTGTGATGTATATGACACTGGAATTGGGATACCAGAAAAGGCAATTCCTACTTTATTTAAAAGATACATGCAAGTAAGTGCAGATCACGCTCGAAAGTATGGTGGAACTGGGCTAGGACTGGCAATATGCAAACAACTGGTGGAATTAATGGGTGGTCATCTAACAGTGTCAAGCAAAGAACACTGTGGCTCTACATTTACTTTTATACTTCCCTACAAGGTTTCTATTCCTTGTGATCATTCAGATGATCCCGATGACGAGCTTTCGGATATGGAGAACGATGACGCTGCGTCTGATGATGCCATGCAAGGATTCTTCCAATTTCGACCACGTACATTGGGCTCACTTTTCTCCTCCAATGGAATTTCCAGAGCCTCAAAGTTGTCATCTCATAAACTTGGCCTCACAATCCCTCATAACTTAAATGGGTTTTCTCAGAATTCTTATTCTCTCCCCTCTAACAACGTCATTTCAAATGGAATCCAAATGACAGTAACGGACGAGCCAGCGATGTCTGAATCATCAGGAAGCTCAGTGCTTGATCAGAGTCCAGAAACAGTGAAAGAAAATGTAGTTAGTAGAGACAAAAAGCGTCAAGATAACAACACATGTGCTCCACTTCAGAATGGTGTTGCAAGCAGAGAAATTGATGTTGAAACAAAGTTAAGTAAAACCCAGCAATCAAGTGAGACACAAGAGACGGGTAACAAAACTAGCCAATGTGTTACTAGCAGAAGTAGTAATAGTAATAGTACATCAGCAATGGCCAAACCCCCGTTAGAGCCTAAGATCCTTCTAGTTGAAGACAACAACGTCAATGTTATGGTGGCACGCTCAATGATGAAGCAGTTTGGTCATAGCATGGATGTGGTGAATAATGGAGTTGAAGCTGTTCGTGCAGTTCAGAGCAGAAGTTATGACCTCATTCTTATGGATGTATGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTGATTCGCTCTTATGAGGAAACTGGCAATTGGGATGCTGCAACAAAAGCTGGAATAGAGCCAAGCATTTCAACTTCAGATTTGCAGAAACCTGAGCTTTCCACAAAGAGAATGCCCATTATTGCAATGACGGCTAATGCTTTGTCAGAGAGTGCGGAAGAGTGTTATGCAAATGGGATGGACTCATTTGTGTCTAAACCAGTGACATTCCAGAAATTGAAGGAGTGCCTTGAACAATTCCTACGGTGA 2964 0.4163 MEHDLMEDMDIEVLPSMWPEDIGTDAGKQFNIEKPGNDMLEEVTIVEEPSIVDFKRLMELTNYTDRGSTQLTYFMKYLEYKQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFEDIRYGDDKRPVSILDEVYDVWQDRPRRKHNAVVQNKGIEIDAEYDTVVYWKKRALHLEKLLEASIQREHTLMEKLEESIKDIERQSTPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPRLGEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELSKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLHVVAQPNSGKPEEVLQKMSGDKSNVPVSGLTEEKYFSSASQSGSDECRSPVKSECSRNGDTEEQHHSTETTVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGHLTVSSKEHCGSTFTFILPYKVSIPCDHSDDPDDELSDMENDDAASDDAMQGFFQFRPRTLGSLFSSNGISRASKLSSHKLGLTIPHNLNGFSQNSYSLPSNNVISNGIQMTVTDEPAMSESSGSSVLDQSPETVKENVVSRDKKRQDNNTCAPLQNGVASREIDVETKLSKTQQSSETQETGNKTSQCVTSRSSNSNSTSAMAKPPLEPKILLVEDNNVNVMVARSMMKQFGHSMDVVNNGVEAVRAVQSRSYDLILMDVCMPVMNGLEATKLIRSYEETGNWDAATKAGIEPSISTSDLQKPELSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKECLEQFLR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1863 987 CDD REC_hyHK_CKI1_RcsC-like 844 982 - -
Mibi08g1863 987 SMART REC_2 842 982 IPR001789 GO:0000160
Mibi08g1863 987 FunFam Histidine kinase 5 207 342 - -
Mibi08g1863 987 FunFam Probable histidine kinase 1 547 657 - -
Mibi08g1863 987 SUPERFAMILY PYP-like sensor domain (PAS domain) 209 327 IPR035965 -
Mibi08g1863 987 Pfam Response regulator receiver domain 844 913 IPR001789 GO:0000160
Mibi08g1863 987 Gene3D - 431 656 IPR036890 -
Mibi08g1863 987 MobiDBLite consensus disorder prediction 802 836 - -
Mibi08g1863 987 PRINTS Bacterial sensor protein C-terminal signature 614 632 IPR004358 GO:0016310|GO:0016772
Mibi08g1863 987 PRINTS Bacterial sensor protein C-terminal signature 579 593 IPR004358 GO:0016310|GO:0016772
Mibi08g1863 987 PRINTS Bacterial sensor protein C-terminal signature 638 651 IPR004358 GO:0016310|GO:0016772
Mibi08g1863 987 Coils Coil 86 113 - -
Mibi08g1863 987 ProSiteProfiles Histidine kinase domain profile. 372 654 IPR005467 -
Mibi08g1863 987 MobiDBLite consensus disorder prediction 748 837 - -
Mibi08g1863 987 SUPERFAMILY CheY-like 842 987 IPR011006 -
Mibi08g1863 987 CDD HisKA 364 426 IPR003661 GO:0000155|GO:0007165
Mibi08g1863 987 MobiDBLite consensus disorder prediction 542 572 - -
Mibi08g1863 987 CDD HATPase_EvgS-ArcB-TorS-like 481 651 - -
Mibi08g1863 987 SMART HisKA_10 365 430 IPR003661 GO:0000155|GO:0007165
Mibi08g1863 987 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 652 IPR003594 -
Mibi08g1863 987 Gene3D PAS domain 207 342 - -
Mibi08g1863 987 MobiDBLite consensus disorder prediction 748 767 - -
Mibi08g1863 987 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 365 430 IPR036097 GO:0000155|GO:0007165
Mibi08g1863 987 Coils Coil 182 202 - -
Mibi08g1863 987 SMART HKATPase_4 476 654 IPR003594 -
Mibi08g1863 987 FunFam Histidine kinase 5 836 987 - -
Mibi08g1863 987 Pfam His Kinase A (phospho-acceptor) domain 367 430 IPR003661 GO:0000155|GO:0007165
Mibi08g1863 987 ProSiteProfiles Response regulatory domain profile. 843 986 IPR001789 GO:0000160
Mibi08g1863 987 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 419 652 IPR036890 -
Mibi08g1863 987 MobiDBLite consensus disorder prediction 555 572 - -
Mibi08g1863 987 FunFam Putative histidine kinase 5 353 430 - -
Mibi08g1863 987 Gene3D - 840 987 - -
Mibi08g1863 987 Gene3D - 354 430 - -
Mibi08g1863 987 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 9 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1863 Mibi-ChrMibi08 35521766 35526712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1863 1 986 Histidine Kinase Gene Family AT5G10720 59.459 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi08g1863 HATPase_c 7.5e-28 CL0025