Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1852 ATGACTAAGAAGATTACATGGAAGTCTATTATCTTCACCTTAAATTGTTACAGGACTGATTACCCCACGTTGCAGGAAAAACAACCTCTGAAACGAGGTTCATTTCAGAGGTTATGCCTCTCAGACATAAGCAATTCCAGCTCATCTCAGGCCATTGATGATCTCTCAATTTCTCTGGCTGGTTCAAAACTTCATATATTCAGCCTAGAGGAACTTAGGGAGGCAACACATAATTTCTCGTGGAGCAATCTTCTTGGTGAAGGAGGATTTGGACCTGTGCACAAGGGATTTTTTGATGAGAAACTTAGGCGTGGATTGAAAGCTCAGCCTGTTGCTGTGAAAAGACTCGACTTAGGTGGATTGCAAGGTCATAGGGAATGGCTGGCAGAGATTATCTTCCTTGGTCAGCTGCAGCATCCACATCTTGTTAAGTTGATTGGGTACTGTTATGAGGAGGAGCATAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAGAACCAGCTCTTTAGAAGGTACTCCGCTGTATTGCCATGGTCAACCAGGATGAAAATTGCGCTGGGTGCAGCTAAAGGCCTGGCCTTTCTTCATGAAGTAGATAAACCAGTAATTTACAGAGATTTCAAAGCTTCAAACATTTTGCTAGATTCGGATTACACAGCCAAACTATCAGATTTTGGGCTGGCAAAGGATGGTCCAGAAGGGGAAGAAACACATGTAACAACAAGAGTAATGGGGACACAAGGCTATGCTGCTCCAGAGTATGTAATGACAGGGCACCTCACAACGAAGAGCGATGTGTATAGCTATGGTGTGGTTCTGTTAGAATTGCTGACAGGGAAGAGGGTGGTGGATAAGAACAGGCCGAGTAAAGAGCATAGCTTGGTGGAATGGGCAAGGCCTATGTTAAGAGATCCCAAAAAGCTGTATCGAGTCATAGATCCCAGATTGGAAGGTCAATTTCCAGCAAGAGGAGCTCGAAAGGTGGCTGCTTTGGCTTACAAATGTTTGAGTCATCATCCAAATCCAAGGCCCACCATGTCCGATGTGGTTGCCATATTGGACACACTTCAGGGTTTCGATGATATTTTCATAGGACCTTTCGTGTATGTTGCCGTAGGTGAAGACCAAAAGGAAGCGTAA 1149 0.4439 MTKKITWKSIIFTLNCYRTDYPTLQEKQPLKRGSFQRLCLSDISNSSSSQAIDDLSISLAGSKLHIFSLEELREATHNFSWSNLLGEGGFGPVHKGFFDEKLRRGLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQLFRRYSAVLPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEYVMTGHLTTKSDVYSYGVVLLELLTGKRVVDKNRPSKEHSLVEWARPMLRDPKKLYRVIDPRLEGQFPARGARKVAALAYKCLSHHPNPRPTMSDVVAILDTLQGFDDIFIGPFVYVAVGEDQKEA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1852 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mibi08g1852 382 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Mibi08g1852 382 FunFam Probable serine/threonine-protein kinase PBL8 162 369 - -
Mibi08g1852 382 Gene3D Transferase(Phosphotransferase) domain 1 162 364 - -
Mibi08g1852 382 ProSiteProfiles Protein kinase domain profile. 79 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1852 382 Pfam Protein tyrosine and serine/threonine kinase 82 355 IPR001245 GO:0004672|GO:0006468
Mibi08g1852 382 FunFam Serine/threonine-protein kinase BIK1 45 161 - -
Mibi08g1852 382 PANTHER OS01G0588500 PROTEIN-RELATED 47 360 - -
Mibi08g1852 382 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Mibi08g1852 382 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1852 Mibi-ChrMibi08 35399477 35401055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1852 65 356 Glycoside Hydrolase AT3G07070 54.576 6.90e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g1852 PK_Tyr_Ser-Thr 2.3e-48 CL0016