Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1848 ATGAGCATATTACGGTGAGGAGGGCTTTTATGTGTCTGCTTGGCTGAGAGAGCAGTTATGGCATTTCGGTTTGGACTTGTTTTTCTGGCCTTTTTCATTTCTTTGAACTTCATCTCGGTGGATTCAGATGATGGAGCAACATTACTAGAGATAAAGACGTCTTTCAGGGACGTGGATAATGTTCTATGTGACTGGACTGACTCTCCATCTTCCGATTACTGTGTCTGGAGAGGGGTCACATGCGATAATGTCACCTTCAATGTCGTTGCACTAAACCTCTCAAGTTTGAATCTGGATGGTGAGATCTCACCTGCAATAGGGGGCCTTAAGAGCTTGGTCTCTATTGACTTTAGGGGGAACCGGTTATCTGGCCAGATACCAGATGAGATTGGTGACTGTTCCTCTTTAAAGAGCTTGGACTTATCATTTAATGAAATACGGGGCGACATACCATTTTCAATTTCAAAGTTGAAACAACTGGAAGATCTAATTTTGAAAAATAACCAGTTAATAGGACCAATTCCTTCTACATTGTCTCAGATTCCCAACTTGAAGATTTTGGACCTGGCTCAAAATAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTCTTGCAATATCTTGGCTTGCGAGGGAACAATTTAGGGGGTTCACTCTCTCCTGACATGTGCCAATTAACTGGACTGTGGTATTTTGATGTGAGGAACAACAGCTTGACTGGCAGTATTCCTGAAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCGGCTGACCGGAAAGATACCATTCAATATTGGATTTCTTCAAGTAGCAACATTGTCATTGCAAGGCAACAAACTCTCTGGACCTATTCCATCAGTGATTGGGCTGATGCAAGCACTTGCTGTATTAGATTTGAGTTGTAACCAGCTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTAACATACACTGAGAAATTGTATTTGCACGGGAACAAACTGTCTGGCCCCATTCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTGAGTGGACGTATCCCACCTGAACTTGGAAAGCTTACTGATCTGTTTGATTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCTGATAATATTAGCTCGTGCAAAAATCTCAACAGCCTCAATGTGCACGGAAACAAGTTAAATGGAACAATCCCCCCAACTTTTCAGAGCTTAGAGAGTATGACGTATCTGAATCTTTCCTCCAACAAGCTTCAAGGTCCCATTCCAATTGAGCTTTCAAGGATCGGTAATTTGGACACTTTGGATATTTCAAATAATAATATTAGTGGCTCCATTCCCTCTTCCCTCGGTGACTTGGAACATCTTCTGAAGTTGAATCTGAGCAGAAATCATCTAACTGGGTTTATTCCAGCAGAGTTTGGTAACTTAAGAAGTGTTATGGATATAGATATTTCAAATAACCAGCTCTCTGGTTTGATTCCTGAAGAACTTAGTCAGCTGCAGAATATGATGTCCCTGAGACTGGAAAAAAACAATCTATCCGGGGATGTTACTTCTCTGATGAATTGCCTTAGCCTTTCCTTACTCAATGTGTCCTATAATAACCTAGTTGGTGTAATTCCAACAAGCAATAATTTCTCCAGGTTTTCTCCAGACAGTTTTATTGGAAACTCTGGTCTCTGTGGCTATTGGATGACTTCACCTTGTCATAGATCTCATCCCACAGAGCGAGTTACGTTATCTAAGGCAGCCATCCTAGGAATTGCTCTTGGTGCGCTTGTGATTCTTCTTATGATATTACTAGCAGCATGTCGGCCATACAATCCGTCTCCATATCCAGATGGATCACTTGACAAGCCAGTTAGTTATTCTCCGCCAAGGCTAGTGATTCTTCATATGAACATGGCCCTTCACGTTTATGAGGATATTATGAGGATGACTGAAAATCTGAGTGAGAAGTACATAATTGGATATGGTGCATCAAGCACAGTATATAAATGCGTCCTTAAGAATTGCAAGCCAGTAGCTATCAAGAGGCTCTATACCCACTATCCCCAAAGCTTGAAAGAATTTGAGACAGAACTTGAGACAGTTGGTAGCATCAAGCACCGTAACCTGGTTAGTCTCCAAGGCTACTCCTTGTCCCCTTACGGGAATCTTCTCTTCTATGATTATATGGAAAATGGCAGTCTATGGGATCTTCTCCATGGAGCTTCTAAGAAGAAAAAGCTTGACTGGGACCTTCGTTTGAAAATAGCACTAGGAGCAGCACAAGGGCTTGCTTATCTACACCATGATTGTTGCCCCCGGATCATCCACAGGGATGTGAAATCATCTAATATTCTGTTGGACAAGGACTTTGAGGCCCATCTCACTGACTTTGGCATTGCTAAAAGTCTATGCCCCTCCAAATCCCACACTTCAACTTACATAATGGGCACAATTGGTTATATAGACCCTGAATATGCTCGAACTTCCCGTCTCACCGAGAAGTCTGATGTTTATAGTTTTGGCATTGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCCAATCTCCATCACCTGATTTTGTCAAAGACAGCGAACAATGCTGTGATGGAGACGGTTGATCCAGATATTACAGCCTCATGTAAGGACATGGGAGCAGTAAAGAAGGTATTTCAGCTAGCCCTTTTATGCACAAAGAGACAGCCAGTTGATAGGCCTACAATGCACGAGGTAATGCGCGTGCTGGGAAGCCTTGTACCACCGTCGTCCCCACCGAAACAAGCAGCCCTACCTCCTGCAGCTTCTGCTCTGCTCCCATCTGCAAAGGTGCCATCTTGCTATATGGATGAGTATGCAAATCTGAAGGCTCCACACTTGGTGAATTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGGGAGGTAATTTCTCAGAACAGTGCATGCGGTTAG 3015 0.4295 MSILRXGGLLCVCLAERAVMAFRFGLVFLAFFISLNFISVDSDDGATLLEIKTSFRDVDNVLCDWTDSPSSDYCVWRGVTCDNVTFNVVALNLSSLNLDGEISPAIGGLKSLVSIDFRGNRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLEDLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNRLTGKIPFNIGFLQVATLSLQGNKLSGPIPSVIGLMQALAVLDLSCNQLSGPIPPILGNLTYTEKLYLHGNKLSGPIPPELGNMTKLHYLELNDNHLSGRIPPELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVHGNKLNGTIPPTFQSLESMTYLNLSSNKLQGPIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDISNNQLSGLIPEELSQLQNMMSLRLEKNNLSGDVTSLMNCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGYWMTSPCHRSHPTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPYPDGSLDKPVSYSPPRLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYTHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDMGAVKKVFQLALLCTKRQPVDRPTMHEVMRVLGSLVPPSSPPKQAALPPAASALLPSAKVPSCYMDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSACG 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1848 1004 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Mibi08g1848 1004 Gene3D Transferase(Phosphotransferase) domain 1 742 940 - -
Mibi08g1848 1004 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 26 120 - -
Mibi08g1848 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Mibi08g1848 1004 ProSiteProfiles Leucine-rich repeat profile. 446 469 IPR001611 GO:0005515
Mibi08g1848 1004 SMART serkin_6 666 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1848 1004 ProSiteProfiles Leucine-rich repeat profile. 135 158 IPR001611 GO:0005515
Mibi08g1848 1004 Gene3D Ribonuclease Inhibitor 365 460 IPR032675 -
Mibi08g1848 1004 Gene3D Ribonuclease Inhibitor 278 364 IPR032675 -
Mibi08g1848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 637 741 - -
Mibi08g1848 1004 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Mibi08g1848 1004 SUPERFAMILY L domain-like 68 324 - -
Mibi08g1848 1004 Gene3D Phosphorylase Kinase; domain 1 641 741 - -
Mibi08g1848 1004 SUPERFAMILY L domain-like 278 565 - -
Mibi08g1848 1004 Gene3D Ribonuclease Inhibitor 41 204 IPR032675 -
Mibi08g1848 1004 Gene3D Ribonuclease Inhibitor 461 586 IPR032675 -
Mibi08g1848 1004 SUPERFAMILY Protein kinase-like (PK-like) 643 932 IPR011009 -
Mibi08g1848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 316 588 - -
Mibi08g1848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 41 205 - -
Mibi08g1848 1004 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Mibi08g1848 1004 Pfam Protein kinase domain 669 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1848 1004 Gene3D Ribonuclease Inhibitor 205 277 IPR032675 -
Mibi08g1848 1004 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Mibi08g1848 1004 Pfam Leucine rich repeat 378 433 IPR001611 GO:0005515
Mibi08g1848 1004 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Mibi08g1848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 206 315 - -
Mibi08g1848 1004 ProSiteProfiles Protein kinase domain profile. 666 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 742 943 - -
Mibi08g1848 1004 SMART LRR_typ_2 492 515 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 468 491 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 109 133 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 348 372 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 420 444 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 181 205 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 229 253 IPR003591 -
Mibi08g1848 1004 SMART LRR_typ_2 300 324 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1848 Mibi-ChrMibi08 35343932 35353989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1848 111 936 Receptor kinase-like Gene Family AT5G07180 68.682 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Mibi08g1848 Pkinase 4.9e-44 CL0016