Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1847 ATGGATATGCATACGTCCACGTGATTTCGCTCTCACGATATCCTCCGTCTCTTTCCTCTGCCACCAATCATGGCGGCTCATCTACTCAGACATTCTCTCTCCCCTCAACCTGGAATCTCCTTCAGTTATAGTAGAAGAAACCATTACATCCCCGGAGTTAACTTTATTTCTCCATTGCCGGTGGAACGACACCACAGCTTCAGACGCCGGAGTAATCTCCGGCCTCCAAACTCTGTCGTATTCAGCTCCCTTGAAACTAGAATCGACTCCGCCGAAACGAAATCGCAAGAGCAGGAGGAGAAGAGTAAGGATTTGCCTATCTTACTAGATGTCTCTGGAATGATGTGTGGAGGTTGCGTCTCACGAGTTAAGAACATTTTGTCTGCCGATGAGCGAGTTGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTTAAGTTGAATAAACTAGACGTCGCTTCGGCTTCAGTTGTAGCCGAGGCCCTTGCTGGGAGACTTACTGAATGTGGATTTCCTACAAAACGGAGGGTTTCGGGTTCAGGAATGGCGGAGAATGTGAGCAAGTGGAGGGATTTGACGAAGAAGAAGGAGGAACTGCTTGCGAAGAGTAGGAACCGTGTTGCCTTTGCTTGGACTTTGGTGGCGTTGTGCTGTGGATCGCATGCTTCGCATATTTTACATTCTTTAGGAATCCACATTGCTCACGGACCTGTGTGGGAAGCTCTTCATAATTCATATGTAAAAGGTGGTATAGCTTTGGCAGCTCTGATGGGACCAGGTCGAGAATTACTGGTCGATGGCCTAAGGGCATTTAGAAAGGGATCACCAAATATGAACTCTCTTGTGGGATTCGGTTCTATTGCTGCATTCATCATCAGTTCGATATCACTACTTAATCCTGGGCTGGCATGGGATGCATCATTCTTTGATGAGCCGGTTATGCTTCTTGGTTTTGTACTTCTAGGACGTTCTTTGGAAGAAAAGGCGAGAATTCAGGCATCTAGTGATATGAATGAACTTTTATCACTGATTTCAACTCAATCAAGACTTGTGATTACTTCCTCTGAAGGCGCTCCATCTGCATCCAGTGTGCTTTGCTCTGATGCAATCTGTGTTGAAGTCCCAACTGACAATATTCGAGTTGGTGATTCAGTGTTGGTTTTGCCTGGAGAAACTATTCCTATAGATGGAAAAGTCATTTCTGGAAGAAGCGTTGTGGATGAATCCATGCTTACAGGAGAATCACTTCCTGTGTATAAAGAAGAAGGCTTCACAGTTTCAGCGGGAACTATAAATTGGGATGGTCCCTTAAGGATTGAAGCTTCTTCAACTGGCTCCAACACAATGATATCCAAAATTGTCCGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCTGGCCCATTTGTATACAGTGTAATGACTCTTTCAGCAGCAACATTTGCATTCTGGTATTTAATTGGGTCACATGTTTTCCCAGATGTTTTACTTAATGATATTGCCGGCCCAGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTTTCTGTAGATGTCTTGGTTGTATCTTGCCCTTGTGCACTGGGCCTTGCCACACCCACAGCAATCCTAGTCGGCACCTCACTAGGTGCAAGAAAAGGACTTCTCATTAGAGGTGGAGATGTATTGGAGCGCTTAGCTAGCATAAACCATGTTGCTTTAGACAAGACAGGAACCATAACCGGAGGAAAACCTGTTGTCTCTGCTGTGGGCTCTTTTAATTATGAAGAATCAGAAATTATTCGGATTGCTGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATCATCAATAAAGCTGAGTCATTAGAATTGGTTCTACCAGTCACAAAAGGACAGTTAGTTGAACCAGGTTTTGGAACCTTGGCAGAAATTGATGGGCGGTTGGTTGCAGTTGGCTCCTTAGAATGGGTACATAAGCGTTTCCAGACAAAAATGAACTCTATTAATTTGATGAATCTGGAGCATGTTTTGAGGAATAAATCATCAAATGATATGCCTTCAAACTATTCGAAAACTATTGTTTATGTTGGACGTGAAGGAGAAGGCACCATTGGTGCTATTGTCATATCTGACATTTTACGTGATGATGCTAAATCTACAGTAATGAGACTCCAGCAGAAGGGTATTAAAACAGTCCTCTTATCAGGGGACAGGGAAGAGGCAGTTGCAACAATTGCAGAGACAGTTGGCATAGAAAGTAGTCTAGTCAAATCATCACTGTCCCCACAGCAGAAATCTAAATACATTTCATCTCTTAAAGCTGCTGGACATTGTGTTGCAATGGTAGGTGATGGGATAAATGACGCACCCTCTTTAGCTGTAGCTGATGTTGGGATTGCTATGCAGAATGAAGCTCAAGAAAATGCTGCATCAGATGCAGCATCCATTATACTTGTTGGGAACAAAATTTCGCAAGTTGTAGATGCCCTAGATCTCGCACAGGCAACCATGGCGAAAGTGTACCAGAATTTGTCATGGGCAATCGCTTATAATGTTGTTGCCATACCCATTGCTGCTGGTGCGTTACTTCCCCAGTTTGATTTTGCCATGACACCTTCGCTTTCAGGAGGACTGATGGCTTTGAGCTCCATTTTCGTGGTTGGAAACTCGTTGCTTCTTCAGCTTCATGAGTTCAAGAACAAGCAATAG 2730 0.4432 MDMHTSTXFRSHDILRLFPLPPIMAAHLLRHSLSPQPGISFSYSRRNHYIPGVNFISPLPVERHHSFRRRSNLRPPNSVVFSSLETRIDSAETKSQEQEEKSKDLPILLDVSGMMCGGCVSRVKNILSADERVDSVVVNMLTETAAVKLNKLDVASASVVAEALAGRLTECGFPTKRRVSGSGMAENVSKWRDLTKKKEELLAKSRNRVAFAWTLVALCCGSHASHILHSLGIHIAHGPVWEALHNSYVKGGIALAALMGPGRELLVDGLRAFRKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGAPSASSVLCSDAICVEVPTDNIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVYKEEGFTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYLIGSHVFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINHVALDKTGTITGGKPVVSAVGSFNYEESEIIRIAAAVEKTASHPIAKAIINKAESLELVLPVTKGQLVEPGFGTLAEIDGRLVAVGSLEWVHKRFQTKMNSINLMNLEHVLRNKSSNDMPSNYSKTIVYVGREGEGTIGAIVISDILRDDAKSTVMRLQQKGIKTVLLSGDREEAVATIAETVGIESSLVKSSLSPQQKSKYISSLKAAGHCVAMVGDGINDAPSLAVADVGIAMQNEAQENAASDAASIILVGNKISQVVDALDLAQATMAKVYQNLSWAIAYNVVAIPIAAGALLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHEFKNKQ 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1847 909 SFLD C1.7: P-type atpase like 559 842 - -
Mibi08g1847 909 SUPERFAMILY HAD-like 575 897 IPR036412 -
Mibi08g1847 909 CDD HMA 109 174 IPR006121 GO:0046872
Mibi08g1847 909 Pfam haloacid dehalogenase-like hydrolase 572 803 - -
Mibi08g1847 909 Gene3D - 567 840 IPR023214 -
Mibi08g1847 909 SUPERFAMILY Calcium ATPase, transduction domain A 369 459 IPR008250 -
Mibi08g1847 909 Pfam E1-E2 ATPase 366 556 - -
Mibi08g1847 909 ProSitePatterns E1-E2 ATPases phosphorylation site. 578 584 IPR018303 -
Mibi08g1847 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 362 881 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi08g1847 909 SUPERFAMILY HMA, heavy metal-associated domain 107 153 IPR036163 GO:0046872
Mibi08g1847 909 FunFam Copper-transporting ATPase 1, putative 332 463 - -
Mibi08g1847 909 FunFam Copper-transporting ATPase PAA2, chloroplastic 587 720 - -
Mibi08g1847 909 SFLD p-type atpase 559 842 IPR044492 -
Mibi08g1847 909 SUPERFAMILY Calcium ATPase, transmembrane domain M 310 868 IPR023298 -
Mibi08g1847 909 Gene3D - 587 720 IPR023299 GO:0000166
Mibi08g1847 909 Gene3D - 100 179 - -
Mibi08g1847 909 PRINTS P-type cation-transporting ATPase superfamily signature 734 744 - -
Mibi08g1847 909 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Mibi08g1847 909 PRINTS P-type cation-transporting ATPase superfamily signature 576 590 - -
Mibi08g1847 909 PRINTS P-type cation-transporting ATPase superfamily signature 409 423 - -
Mibi08g1847 909 Pfam Heavy-metal-associated domain 109 172 IPR006121 GO:0046872
Mibi08g1847 909 ProSiteProfiles Heavy-metal-associated domain profile. 106 177 IPR006121 GO:0046872
Mibi08g1847 909 Coils Coil 81 101 - -
Mibi08g1847 909 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 280 900 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mibi08g1847 909 Gene3D - 332 463 - -
Mibi08g1847 909 PANTHER ATP7, ISOFORM B 90 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1847 Mibi-ChrMibi08 35327471 35336876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1847 262 908 Primary Pumps ATPases AT1G63440 36.006 3.23e-116 377