Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1838 ATGGGGAGAAAAACTTCTCGCAGTAATGAAGGGCAGAAAAGGGAGGCTTGGACTGCTCAAGAAGACAAACTACTAGCTACTTATATCAGGGCCCATGGAGAAGGCAAATGGAAAAACATCCCCAAACTCACTGGTCTTAGGAGATGTGGGAAATCTTGTAGGCTTCGGTGGATGAATTATCTGAGGCCTGATATTAAGAGAGGCAACATTACTGAAGACGAGGAAGACCTCATTCTCAGGCTCCACAATCTCTTAGGCAACAGATGGTCACTCATAGCAGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAAAACTACTGGAACACCAACTTGGCCAAGAAGCGATCAATTTCAAAAGATATATCTCAAAATGGCAAAAGGGAAATTGCAGAATCAAGTTTTTCCCAGGAGACATTGGAGAGAATTATTCTGGAAGAGCCCACGGAATCTCCGATGGAAACCAAGAGAGAGGATTATGGCGAATCTGTTTTAGATACAGGGGAATCTGTTCCTGTTGATGGTCAATCGGAAGAAAATGTGGATGGGGCTTTGATGGATTTTGATCTCAAAGACATGGACTTGACGGAGTTTCTGGACTTTGATTTTACTGGACTTACAGATTTTGACATGTTCTTTAACATGGAAGATTCGAATCAAGAAGGAAGGCAGAGTGATTCTCAGTCATTATCATTTGCTGCTGAAGAAAAAGCCGAGCTAGGGAAATGA 729 0.428 MGRKTSRSNEGQKREAWTAQEDKLLATYIRAHGEGKWKNIPKLTGLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLAKKRSISKDISQNGKREIAESSFSQETLERIILEEPTESPMETKREDYGESVLDTGESVPVDGQSEENVDGALMDFDLKDMDLTEFLDFDFTGLTDFDMFFNMEDSNQEGRQSDSQSLSFAAEEKAELGK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1838 242 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi08g1838 242 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi08g1838 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi08g1838 242 FunFam MYB-related transcription factor 13 66 - -
Mibi08g1838 242 SMART sant 66 114 IPR001005 -
Mibi08g1838 242 SMART sant 13 63 IPR001005 -
Mibi08g1838 242 Gene3D - 6 67 - -
Mibi08g1838 242 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi08g1838 242 MobiDBLite consensus disorder prediction 217 232 - -
Mibi08g1838 242 CDD SANT 71 112 IPR001005 -
Mibi08g1838 242 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 150 - -
Mibi08g1838 242 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi08g1838 242 MobiDBLite consensus disorder prediction 217 242 - -
Mibi08g1838 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi08g1838 242 CDD SANT 16 61 IPR001005 -
Mibi08g1838 242 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi08g1838 242 Gene3D - 71 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1838 Mibi-ChrMibi08 35236101 35237011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1838 1 179 MYB Transcription Factor Family AT4G38620 51.397 3.82e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1838 Myb_DNA-binding 5.4e-15 CL0123