Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1837 ATGGGGAGGAGGCCATGTTGCTGCAAGGAAGGAGTGAACAGAGGAGCCTGGACTTCCATTGAAGACAATTTACTCTTCTCTTACGTTCAATCCCATGGCGAAGGCAAATGGCGAAACCTACCCCTCCGAGCTGGCCTCAGAAGATGTGGCAAAAGTTGCAGGCTTCGCTGGTTAAACTATCTCAGGCCCAACATCAAGCGAGGCAACATCACTCACGACGAAGAAGATCTCATTCTCAGACTCCACAAACTCCTTGGTAACAGATGGTCTCTCATAGCTGGAAGGCTTCCTGGTAGAACAGACAATGAGATCAAGAACTATTGGAACTCTACTCTGGCAAAGAAGCTTAGACACTTGGATCCTATAACAGCCAAGAAAGTAGCTGATCCTCAGCAACAACCTCAATTAATTCAAACAAAACCCGGGCGGTGTAACAACCTACTTATCCAACAACATCCTGAAGAAAACTCCACCATTAACTCTTGGGCTTCAAACCACACAGAGGTTGATGATGAACTTCCCATGGCCACAAATCTACCTTCGAAACCTCAAGTTCATGGAAATCAAAATTCGGATGTGAATGTGTGGAGTTGTGGGAGCGATTATGATCACTTTGGGCTGAGTGAAGGAAATTTGTACGGAGATGCAGGGATGTTTAACATGGACCAGCCCCTACCCATTGACGAACTTACGGTCAATGCGTGGGACACCACAACAAGTGGCTTCCATGTCCCAGATAATAATGGCCCTATGGATCTAGAATCACTCGCCCTCCTCTTCGACTATGGGAACTGGCCATGA 801 0.4694 MGRRPCCCKEGVNRGAWTSIEDNLLFSYVQSHGEGKWRNLPLRAGLRRCGKSCRLRWLNYLRPNIKRGNITHDEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSTLAKKLRHLDPITAKKVADPQQQPQLIQTKPGRCNNLLIQQHPEENSTINSWASNHTEVDDELPMATNLPSKPQVHGNQNSDVNVWSCGSDYDHFGLSEGNLYGDAGMFNMDQPLPIDELTVNAWDTTTSGFHVPDNNGPMDLESLALLFDYGNWP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1837 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi08g1837 266 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi08g1837 266 SMART sant 13 63 IPR001005 -
Mibi08g1837 266 SMART sant 66 114 IPR001005 -
Mibi08g1837 266 FunFam MYB-related transcription factor 13 66 - -
Mibi08g1837 266 Gene3D - 70 140 - -
Mibi08g1837 266 Gene3D - 14 66 - -
Mibi08g1837 266 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi08g1837 266 CDD SANT 71 112 IPR001005 -
Mibi08g1837 266 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi08g1837 266 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi08g1837 266 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi08g1837 266 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 177 - -
Mibi08g1837 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi08g1837 266 CDD SANT 16 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1837 Mibi-ChrMibi08 35228945 35229911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1837 1 131 MYB Transcription Factor Family AT2G16720 64.662 6.91e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1837 Myb_DNA-binding 2.6e-12 CL0123