Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1835 ATGGAGAGATATTCAGTTTCATGTTGCTCCAAGAAAGGAGATGGGCTGAAAAGAGGAGCATGGACTGATCTAGAGGACAGGTTACTCGCTTCTTACGTTATAGCCTACGGCGAAGGCAAATGGACCCACGTCCCCAAAGCCGCTGGCTTGAACAGAAGTGGGAAAAGCTGTAGACTAAGATGGTTGAACTATCTCAGGCCAGACATTAAGCGAGGAAACATCACTAGCGATGAAGAAGATCTCATCATTAGGCTCCATAAACTTATCGGCAACAGATGGTCTCTCATAGCTGGAAGGATACCAGGACGAACAGACAATGAAATAAAAAACTACTGGAACACAACTCTTTCAAAGAAGCTTAGGACACAATCATGTACAATGAAGACTGAACGAAATAAATCGAACGTGGTTATCCAAACAAAGCCTTGGAAATGCAAAAACGTGGTTATCCGACATCCTCCATGTCCGAAGGAAAATTTGCTTCTTTCAAACCAAATAGAGTTTCAAGAAGCTGATCAAACCACCACCCACTTCACCAATCAATCTCAAAACTCGTCACCTCCTCCTCCAGAGTCTCGAGTTCATGTCCATGAGCATCATCAGTTTAATCAAAATGACAACTTCGAAGTGAATTTGTTGGGTCTTGAAAACAATAATAGTAGTTCTCTTTGTACGGAATTCAATGATCAGTGTCAACCTATTGACCAAGTTATGTTCAATGGTTGGAGCACGAGTTGCTTGGAGGTGGACATGGATAGTATTGGCTCATGGGAGATGGATTCATTGGCCCTTCTCATGGAATCTGAGGTTTCGGGCGCGAGTCCCTTGATTTGA 834 0.4317 MERYSVSCCSKKGDGLKRGAWTDLEDRLLASYVIAYGEGKWTHVPKAAGLNRSGKSCRLRWLNYLRPDIKRGNITSDEEDLIIRLHKLIGNRWSLIAGRIPGRTDNEIKNYWNTTLSKKLRTQSCTMKTERNKSNVVIQTKPWKCKNVVIRHPPCPKENLLLSNQIEFQEADQTTTHFTNQSQNSSPPPPESRVHVHEHHQFNQNDNFEVNLLGLENNNSSSLCTEFNDQCQPIDQVMFNGWSTSCLEVDMDSIGSWEMDSLALLMESEVSGASPLI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1835 277 Pfam Myb-like DNA-binding domain 71 115 IPR001005 -
Mibi08g1835 277 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Mibi08g1835 277 SUPERFAMILY Homeodomain-like 15 112 IPR009057 -
Mibi08g1835 277 Gene3D - 74 141 - -
Mibi08g1835 277 Gene3D - 18 70 - -
Mibi08g1835 277 MobiDBLite consensus disorder prediction 175 190 - -
Mibi08g1835 277 SMART sant 70 118 IPR001005 -
Mibi08g1835 277 SMART sant 17 67 IPR001005 -
Mibi08g1835 277 FunFam Myb transcription factor 18 70 - -
Mibi08g1835 277 CDD SANT 75 116 IPR001005 -
Mibi08g1835 277 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 205 - -
Mibi08g1835 277 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Mibi08g1835 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Mibi08g1835 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Mibi08g1835 277 MobiDBLite consensus disorder prediction 175 197 - -
Mibi08g1835 277 CDD SANT 20 65 IPR001005 -
Mibi08g1835 277 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1835 Mibi-ChrMibi08 35201861 35202898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1835 1 131 MYB Transcription Factor Family AT3G13540 63.359 7.11e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1835 Myb_DNA-binding 3.6e-14 CL0123