Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1834 ATGAGGAGGAGTTCAAGTTGCCCTGGGGAGGTAGAAAAATTGAACAGAGGAGCATGGACTGCTCAAGAGGACAAGTTGCTCACTTCTTATATCATGATCCACGGCGAAGGAAAGTGGAGCCATGTCCCTACTAGAGCTGGATTGAATAGGAGTGGCAAAAGCTGTAGGCTTCGATGGTTGAACTATCTGAGGCCTGATATTAAGAGAGGCAACATCACCCAAGACGAAGAAGACCTCATTATTAGACTTCATAAACTTCTCGGTAACAGATGGTCTCTTATAGCTGGAAGGCTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTGCGTTGGGAAAGAAGCTTAGAACACAATCAGGAGAAGGGACATCGTCGCAGCAACAACGACAACATGCATCCAGCAAATCAAGTGATGAGTCTGATGATGTTATCACTCGACCATCACAAGTAATCCAAACGAAGGCCGTAAGATGCAAAAATGTGTTTATCCAACAACATCCACCTAATTGTCATGAGGAAACGTACACCATCAACTCTCTAAATTCCAACCACTTAGGGTTTGAACTAGCTCCACAGTTCACGAACCAGTTTCTCCAGGATCTTGAACCCAAAGATGAGTTTAAAGATGAATTGAATGCGGCAGGTTTTTTCGGAGAGTTTAACCTTGACAATTGCATTATTGACATGGCCATGGATGCTGAAGCAAACGAGTTCTCACTTATTGGCAATTGTGGGACAGCTGATGGATTCAGGAACATTGGCACTATGGATCTTGATTTAATGACATTCTTGTTGGATTCATCTTCTGGCTCTGGGGATTGGCCCTGA 837 0.4373 MRRSSSCPGEVEKLNRGAWTAQEDKLLTSYIMIHGEGKWSHVPTRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTALGKKLRTQSGEGTSSQQQRQHASSKSSDESDDVITRPSQVIQTKAVRCKNVFIQQHPPNCHEETYTINSLNSNHLGFELAPQFTNQFLQDLEPKDEFKDELNAAGFFGEFNLDNCIIDMAMDAEANEFSLIGNCGTADGFRNIGTMDLDLMTFLLDSSSGSGDWP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1834 278 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mibi08g1834 278 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Mibi08g1834 278 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mibi08g1834 278 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 167 - -
Mibi08g1834 278 CDD SANT 73 112 IPR001005 -
Mibi08g1834 278 CDD SANT 18 63 IPR001005 -
Mibi08g1834 278 Gene3D - 9 69 - -
Mibi08g1834 278 SMART sant 15 65 IPR001005 -
Mibi08g1834 278 SMART sant 68 116 IPR001005 -
Mibi08g1834 278 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mibi08g1834 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mibi08g1834 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 63 IPR017930 -
Mibi08g1834 278 FunFam Myb transcription factor 16 68 - -
Mibi08g1834 278 MobiDBLite consensus disorder prediction 119 136 - -
Mibi08g1834 278 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mibi08g1834 278 FunFam Transcription factor TT2 72 143 - -
Mibi08g1834 278 Gene3D - 71 146 - -
Mibi08g1834 278 MobiDBLite consensus disorder prediction 119 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1834 Mibi-ChrMibi08 35180191 35181545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1834 1 199 MYB Transcription Factor Family AT2G16720 46.117 6.95e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1834 Myb_DNA-binding 3.2e-15 CL0123