Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1830 ATGGATGCAAAGTTTCAAGCTTTTAAAGGCAGTGAAGTGAGCATGACGGAGAAGAAATCATGCAACGAAGGGGAAGTGGTAGTGATTATTCCTGGCCAGCAGAATCCGAATCTCACTGGAGAGAGTCCAACCTCCAAAGTCACTGAATCTAACAATACATCCACCCATCATGCAAATGGGTCTGCCTCCTTAAAGTCCTCACCTTTAAATCATGCTTCCCCTGAAATAAGGTTCAATTCAATCCCAAACAGGCCTCCAGAAGTTTCTGCTCCCACCGGAAAACTTATTCGCAGAAGGTCTCTACAAAGGTCAGTGTATTCTAAACCTAAATCTAGATTTGGGGAACAACCTTATCCTGCCGATGCAACATTTGTGGAAGAGAATGGCACTTCCACCCTGCAGGAACATCCTGCCGGTGAAGCATCACCTAATAACAAATCTAGTACTGTTAATAGGACATTGTCACCTAGTTCTGTCACCCCTAGGACCCCATTAATGGCGTCTCCGGGGCCAGCTGGGGAAGATGAGGCTGAAATTGCTTACAAGAAAGTTGAACTGAGTAGAGGGAAGCGCAAGAGGGTGAAGGTTAAGGTTTTGATAGAGTGTCTTTTGGTTGCCTGCATTACTGGATCCTTGGTGGCTGGCCTCACTGTTGAGAAATTGAAAAATGTTGAGATTTGGGGGTTGGGATTTTGGAAGTGGTGTGTACTTTTTATGGTTATCTTTTGTGGCATGTTCATTACCAAATGGATCATGCACATTATAGTCTTCCTGATTGAAATGAACTTTTTACTGAGGAAAAAGGTTCTCTATTTTGTGCATGGGCTTAAGAAAAGCGTCCAAGTCTTCATTTGGCTGGTTTTGGTTCTTGTAGCTTGGGTTCTGTTAATCAATCCTGGGTTCCAGAAATCAGAATTTCGCTCAAAAATTTTGAATGGTTTTACAGGGACTCTTGTTTCTCTTCTCATTGGGTCATTCTTATGGGTGGTGAAGACGTTGCTGTTGAAGATATTAGCCTCAAACTTCCATGTCAAATCTTTTTTTGATAGAATTCAAGAATCTATTTTCCATCAGTATGTTTTGCAGAGTCTATCTCGGCCTCCATTAATAGAGGAGGCTGAGAAGGTGGGCAGATCACGGAGTACTGGCCATGTTAGTTTCAGGAGTACAAAAGGTGAAAAGGGCGCAAAGAAAGGGGTTATCAATATGGCAACATTTCACCGGATGAAACGGGAGAAAGTTTCTGCTTGGACAATGAAGATTTTGGTTGATGCAGTGGCAAATTCAAGGCTATCCACAATATCCAATGTGTTAGATGAGAGCTTTGATGAAGGTGGACGAGAACAAACTGATCAAGAGATTACAAATGAGATGGAAGCAACTGCTGCTGCATATAAGATTTTCAGGAATGTCGCTGCCCCTGGTTGCTCGTACATAGATGAAGATGACCTCCATAGGTTCATGATTAAGGAAGAAGTAGATCTTGTCTTTCCGCTATTTGAAGGATCAGAGACTGGACGAATAGACAGAAAAGCTTTGACAAACTGGGTGGTGAAGGTCTACCAGGAACGCAAGGCACTGGCACATGCCTTAAGTGACACCAAGACTGCTGTAAAGCAATTGAACAAGCTTGTGACAGGGCTCTTGGTTATTCTGATCATAATTGTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTATTAGTGTTCATTTCATCTCAGCTTGTAGTTGCGAGCTTCATGTTCGGAAGCACATGCAAAAATATATTTGAGGCTCTCATATTTGTGTTTGTGATGCATCCATTTGATGTGGGCGACCGATGTGTTGTAGATGGAGTTCCGCTATTGGTCGAAGAAATGAACATCTTGACAACGGTATTCTTGAAACTTGATAATGAGAAGGTGTTCTACCCAAACTCAGTTCTGGCCACAAAACCCATCAGCAATTATTACAGAAGCCCTGATATGGGTGATGGTATAGAGTTTTCGATTGACTTTATGACACCATTGGAGAGGATTGGGGCAATGAAGGAGAAAATAAAGAGGTACTTGGAGAGAAATCCGCAACACTGGCATCCTAAACACAATGTAGTGGTGAAGGAGATAGAAAACGTGAATAAGATTAAAATAGCTCTGTATGTTAACCACACAATGAATTTTCAAGACTATGGGGAGAAGAACACGAGGAGAACAGAACTAGTGATGGAACTAAAGAAAATATTTGAGGAGCTTGAAATTAGATACCATCTTCTTCCTCAGGCAGTTCATCTCAGCTATGTTGATGGATCAGATACGGGTCCACTCAAGTGTTAA 2316 0.4206 MDAKFQAFKGSEVSMTEKKSCNEGEVVVIIPGQQNPNLTGESPTSKVTESNNTSTHHANGSASLKSSPLNHASPEIRFNSIPNRPPEVSAPTGKLIRRRSLQRSVYSKPKSRFGEQPYPADATFVEENGTSTLQEHPAGEASPNNKSSTVNRTLSPSSVTPRTPLMASPGPAGEDEAEIAYKKVELSRGKRKRVKVKVLIECLLVACITGSLVAGLTVEKLKNVEIWGLGFWKWCVLFMVIFCGMFITKWIMHIIVFLIEMNFLLRKKVLYFVHGLKKSVQVFIWLVLVLVAWVLLINPGFQKSEFRSKILNGFTGTLVSLLIGSFLWVVKTLLLKILASNFHVKSFFDRIQESIFHQYVLQSLSRPPLIEEAEKVGRSRSTGHVSFRSTKGEKGAKKGVINMATFHRMKREKVSAWTMKILVDAVANSRLSTISNVLDESFDEGGREQTDQEITNEMEATAAAYKIFRNVAAPGCSYIDEDDLHRFMIKEEVDLVFPLFEGSETGRIDRKALTNWVVKVYQERKALAHALSDTKTAVKQLNKLVTGLLVILIIIVWLLLMEIATTKVLVFISSQLVVASFMFGSTCKNIFEALIFVFVMHPFDVGDRCVVDGVPLLVEEMNILTTVFLKLDNEKVFYPNSVLATKPISNYYRSPDMGDGIEFSIDFMTPLERIGAMKEKIKRYLERNPQHWHPKHNVVVKEIENVNKIKIALYVNHTMNFQDYGEKNTRRTELVMELKKIFEELEIRYHLLPQAVHLSYVDGSDTGPLKC 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1830 771 MobiDBLite consensus disorder prediction 1 120 - -
Mibi08g1830 771 MobiDBLite consensus disorder prediction 133 173 - -
Mibi08g1830 771 MobiDBLite consensus disorder prediction 133 164 - -
Mibi08g1830 771 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 759 IPR016688 -
Mibi08g1830 771 SUPERFAMILY Sm-like ribonucleoproteins 592 651 IPR010920 -
Mibi08g1830 771 MobiDBLite consensus disorder prediction 32 77 - -
Mibi08g1830 771 PIRSF Memb_At2g17000 11 766 IPR016688 -
Mibi08g1830 771 FunFam Predicted mechanosensitive ion channel 602 651 - -
Mibi08g1830 771 Gene3D - 602 651 IPR023408 -
Mibi08g1830 771 Pfam Mechanosensitive ion channel 543 748 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1830 Mibi-ChrMibi08 35103547 35106835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1830 15 759 Mechanosensitive Ion Channel Family AT5G12080 57.312 0.0 837