Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1829 ATGGCACCGGAGGTGATTAAATGCGAGCCTTATAATGAAAAGTGTGACATATACAGTTTTGGGGTGATACTAAACGAGCTTCTCACAGGGAATTACCCTTACATTGAGACAGACTACAGTCCCACCAAGATTGCGGCAGAAGTAGTGGAGGGGAAGCTGAGGCCTATGGTTTCGGAGGATAGAGAAGGGGAAGTGGAAGAGCTGGCGCAACTAATCAGACTTTGTTGGGATGGAAATCCAAGCGTGAGACCCTCATTTGCTAGCATCACTAATACCCTCAAAGCCTTCGTCCAAAGGCCATCTTTCAATTCAAGAGCCTGA 321 0.4704 MAPEVIKCEPYNEKCDIYSFGVILNELLTGNYPYIETDYSPTKIAAEVVEGKLRPMVSEDREGEVEELAQLIRLCWDGNPSVRPSFASITNTLKAFVQRPSFNSRA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1829 106 Pfam Protein tyrosine and serine/threonine kinase 1 93 IPR001245 GO:0004672|GO:0006468
Mibi08g1829 106 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Mibi08g1829 106 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 96 - -
Mibi08g1829 106 SUPERFAMILY Protein kinase-like (PK-like) 1 92 IPR011009 -
Mibi08g1829 106 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1829 Mibi-ChrMibi08 35100676 35101108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1829 1 105 MAP Kinase Kinase Kinase AT4G35780 35.238 2.39e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Mibi08g1829 PK_Tyr_Ser-Thr 3e-15 CL0016