Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1828 ATGAGCACAAGTTTCAGAGACAGCCCTGAAATTATGCAGAGTATAGCTTCCCCACGACTGTCTCGGCAATCATCCAAATCGAGCTACAGGCAGAAGCAAATAGTGGAGGCATCAAGCCCTGTTCCTGGTGGATGCTGCCGAGGTTTCGGTAATGTCAAGACCCCTGGACCGAATTTGTCAACCTTGCAATACCAACAACAGCTCCAACATTCCAAGAGACTCGAAGGCAAGGTGGCAGATCTGGAGAAAGAGGTGCAGAGGCAAAAGGAGCTGCGAGTGATGTATAGGAAAAGGATGGAAAGAACACAAGACTATCTGAGATACTGCCTCCAAATAGCACAAGAGAATGGTATATTGGACCTCATCACCCACTCCAAAGACAACCTCCAACAATCACCTTCACCACTACATGCCTACAGTTCTGACGCCAGCCCTCAAATTCGCTCTACCGTCCACCACCACCACCACCGATGCCACCCAGATCTCGTAGCCATCACCGATCAAGCCAAAACACATGGATGGCACATTGATCCTAACGAGATTCAATTGGAGGAGAAGATAGGACAGGGAAGCACGGCGGAGATTTATAGAGCAACATGGCGAGGATATGATGTGGCAGTGAAGTGTTTATCATCGGAATTTTTCAGAACAAACCCAAACGGAGTCCTATTTTTCGCTCAAGAGGTGGAAACTCTGTCGAGACAGAGGCATAGGTTTGTGCTTCAATTAATGGGTGCATGCCTAGAGCCTCCCCACCATGCCTGGGTGGTCACCGAGAACGTGAGCACCAACCTCAAAGATTGGCTTCACGGAGCCGGCAAGAGAAGAAGAGACAGGCAAATCCCACTTCCTTCCTTGAAAAACAGAGTCACCAGAGCTCTAGAGATCGCTCAAGCCATGCAATATCTTCATGAACAGAAGCCCAAGATCATCCACCGTGACCTCAAACCCAGTAACATTTTCTTGGATGACGCTCTCCACGTCAGAATCGCTGATTTTGGCCATGCCCGCTTCTTGGGTGACCACGAAATGGCCCTCACCGGCGAAACAGGCATGCCCCATTTAATACATATATGCTCTCATCGATCTCTCTTAGAATGA 1101 0.4896 MSTSFRDSPEIMQSIASPRLSRQSSKSSYRQKQIVEASSPVPGGCCRGFGNVKTPGPNLSTLQYQQQLQHSKRLEGKVADLEKEVQRQKELRVMYRKRMERTQDYLRYCLQIAQENGILDLITHSKDNLQQSPSPLHAYSSDASPQIRSTVHHHHHRCHPDLVAITDQAKTHGWHIDPNEIQLEEKIGQGSTAEIYRATWRGYDVAVKCLSSEFFRTNPNGVLFFAQEVETLSRQRHRFVLQLMGACLEPPHHAWVVTENVSTNLKDWLHGAGKRRRDRQIPLPSLKNRVTRALEIAQAMQYLHEQKPKIIHRDLKPSNIFLDDALHVRIADFGHARFLGDHEMALTGETGMPHLIHICSHRSLLE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1828 366 ProSitePatterns Protein kinases ATP-binding region signature. 187 208 IPR017441 GO:0005524
Mibi08g1828 366 ProSiteProfiles Protein kinase domain profile. 181 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1828 366 SUPERFAMILY Protein kinase-like (PK-like) 170 345 IPR011009 -
Mibi08g1828 366 Gene3D Transferase(Phosphotransferase) domain 1 262 357 - -
Mibi08g1828 366 Coils Coil 64 98 - -
Mibi08g1828 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Mibi08g1828 366 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 88 352 - -
Mibi08g1828 366 SMART serkin_6 181 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1828 366 MobiDBLite consensus disorder prediction 1 34 - -
Mibi08g1828 366 Pfam Protein kinase domain 182 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1828 366 Gene3D Phosphorylase Kinase; domain 1 169 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1828 Mibi-ChrMibi08 35098878 35100634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1828 180 356 MAP Kinase Kinase Kinase AT5G03730 35.519 3.02e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Mibi08g1828 Pkinase 6.8e-27 CL0016