Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1822 ATGGATAATAAGGGGAAGGTTCATGAATGTTCCATATGCGGTTCAGAATTCACGTCGGGCCAGGCATTGGGTGGCCACATGAGGAGGCATCGCCCATCCACGGTCGCCCTCCCTCCTTCTGCAGTGACTTTTGACGATGCCACCACAGCAGCCGCCGTGGCTGTAGTAAAGCCAAGAGTGCTGTCTTTGGATCTAAACCTACCGGCGCCGGAGGAGGATTCCAAATTTGATCAGTTGACGGCGGCGGCGGCAGCCAAAGCAAAACCATTGATGCTGTCTGCTTCTCCTTCTTTGGTTGGATGCCATTATTAG 312 0.5353 MDNKGKVHECSICGSEFTSGQALGGHMRRHRPSTVALPPSAVTFDDATTAAAVAVVKPRVLSLDLNLPAPEEDSKFDQLTAAAAAKAKPLMLSASPSLVGCHY 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1822 103 PANTHER ZINC FINGER PROTEIN ZAT5 3 77 - -
Mibi08g1822 103 Pfam C2H2-type zinc finger 7 32 - -
Mibi08g1822 103 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 30 IPR013087 -
Mibi08g1822 103 Gene3D Classic Zinc Finger 1 37 - -
Mibi08g1822 103 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Mibi08g1822 103 SUPERFAMILY beta-beta-alpha zinc fingers 5 32 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1822 Mibi-ChrMibi08 35049996 35050307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1822 1 103 C2H2 Transcription Factor Family AT2G28200 42.857 3.68e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi08g1822 zf-C2H2_6 2.7e-12 CL0361