Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1813 ATGTCCGTCCACCAGCCATTTGACGGCGGAGCTCTGCCTCTAAACACCACGGTGGTGGCCGTCGACAAAGGCAAGGCCAGCTTACATGCCTTCCGGTGGGCCCTTAATCATCTTGATTATCCCGTCATCGTCGCCCTCCACGTTAGGCTTAAACAAATCACACCCCATGAGGGCCTCAAGGTTTTCCCCCCTGATGACAGCGATATAGCCCATGTTTTCTCTGCATTACGAGAAATATGTGCAAATAAGGTGGTGACGATAATAGAAGCCGTAGTTGATGATAGTGATGTTGTCAAAGGAATTTCAGAATTTGCAAACAAGTATCATATCAGTAGTATCGTTATTGGCGCAACGGCTAGCTGGAACTCTCTGGCAAGGAAATTTATAGGTTTTGATTTGCCAACCGCCATAATCAAATCAGCTCCAGATTATACTTCTGTGTACATGATTTCAAAAGGGAAGAGAGCCTCAGTTCGATCGGCACGACGTCCATTGCCAAACAAACCACATGATGCAGAAAACGGAGTAAGGGAACATGCATCTAAAAGAGGAGGAAAAACAGAGGGATCAGAAAAAACTTCTTCTGAGAGAGACAAGAATGAAGCAAGGCAAAAGAGTTATGGTAGTTCGTCGTTGGATAAAATCAACCTACCTAATCATGGGGTGAAGCCATCAGGTGGCCCTGATTCTTTTTCAGATGAAAGTGTTTCATCAGATCTATCTAAGAAAGATTTTGAGTTTAGCTTTTCATCTGATGGTTCCAGGGCGTTATCATCTTCCCAGCCCTCAAAAGAGGTAGAAGCTCAAATGAAGAGATTGAGGCTTGAACTGAAGCAAACCATGAATATGTATAGCTCAGCTTGCAAAGAGGCAATCTCGGCAAAAAATAAGGCTGACGAGATTCATCAATGGAAACAGGAGGAGGCACATAAACTTGAGGAGGCTATAATGTCAGGAGAGGCAGCTCTTGCATTAGCAGAAAAGGAAAAGGCTAGAGCCCAAGCTGCCATAGAAAAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGACATGCAGAGCTAAAGGCCAGGAAAGAGGCAGAAGAAAAGGATCGAGCTTTAACTGCTTTGGCTAAAAATGATGTCCGATATAGAAAATACACTATAAAAGAGATCGAACAGGCCACTGAAAAGTTCTCCCCATCTTTGAAAATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGTGAACTTGATCTCACCCCAGTTGCCATCAAAATTTTAAGACCTGATGCTACTCAAGGCAGGAAACAGTTTCACCAAGAGGTTGAGGTACTATGCTGCATTAGGCATCCTAATATGGTTCTCCTCCTTGGTGCCTGTCCTGAGTATGGGTGTCTGGTGTATGAATACATGGAAAATGGTAGCTTGGAGGATAGACTATTTCGGAAGAATAAAAGCCCACCTCTTTCATGGAGGTTAAGGTTCACAATAGCTGCTGAAATTGCAACAGCACTTCTTTTCCTTCATCAAAGCAAGCCAGAACCACTTGTGCATCGGGACCTAAAACCAGCCAACATCCTCTTAGACCGGAATTATGTGAGTAAGATCAGTGATGTGGGCCTGGCACGGTTGGTTCCGCCATCTATAGCCGATTCTGTCACACAATATCACATGACTTCGGCTGCTGGAACCTTATGCTACATTGATCCTGAGTATCAACAAACTGGAAAATTAACAACTAAATCAGATATATATTCATTGGGGGTAATGCTGCTACAAATCATCACAGCTAAGCCTCCCATGGGTATTGCCCACCATGTCAAAAGGGCGATTGAGAGGGGAAAATTCTCAGAGATGCTTGATCCTAGAGTGACTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCAAAAGTGGCAGTGAGTTGTGCAGAGCTTAGCAAGAAGGACAGGCCAGATCTTGCAACGGTTGTTGTGCCAGAACTCAACCGCTTAAGGAACTTTGGCCTCATGTCTAATTCTAGCTAG 2022 0.4441 MSVHQPFDGGALPLNTTVVAVDKGKASLHAFRWALNHLDYPVIVALHVRLKQITPHEGLKVFPPDDSDIAHVFSALREICANKVVTIIEAVVDDSDVVKGISEFANKYHISSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYMISKGKRASVRSARRPLPNKPHDAENGVREHASKRGGKTEGSEKTSSERDKNEARQKSYGSSSLDKINLPNHGVKPSGGPDSFSDESVSSDLSKKDFEFSFSSDGSRALSSSQPSKEVEAQMKRLRLELKQTMNMYSSACKEAISAKNKADEIHQWKQEEAHKLEEAIMSGEAALALAEKEKARAQAAIEKAEEAKKMAEKEAERRRHAELKARKEAEEKDRALTALAKNDVRYRKYTIKEIEQATEKFSPSLKIGEGGYGPVFKGELDLTPVAIKILRPDATQGRKQFHQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRKNKSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSIADSVTQYHMTSAAGTLCYIDPEYQQTGKLTTKSDIYSLGVMLLQIITAKPPMGIAHHVKRAIERGKFSEMLDPRVTDWPVEEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGLMSNSS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1813 673 Pfam Protein tyrosine and serine/threonine kinase 402 656 IPR001245 GO:0004672|GO:0006468
Mibi08g1813 673 MobiDBLite consensus disorder prediction 158 237 - -
Mibi08g1813 673 Pfam Universal stress protein family 18 130 IPR006016 -
Mibi08g1813 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Mibi08g1813 673 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 119 - -
Mibi08g1813 673 Coils Coil 309 369 - -
Mibi08g1813 673 ProSiteProfiles Protein kinase domain profile. 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1813 673 MobiDBLite consensus disorder prediction 164 204 - -
Mibi08g1813 673 MobiDBLite consensus disorder prediction 251 266 - -
Mibi08g1813 673 CDD STKc_IRAK 403 663 - -
Mibi08g1813 673 Coils Coil 263 283 - -
Mibi08g1813 673 SMART serkin_6 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1813 673 FunFam U-box domain-containing protein 51 470 670 - -
Mibi08g1813 673 Gene3D Transferase(Phosphotransferase) domain 1 470 667 - -
Mibi08g1813 673 SUPERFAMILY Protein kinase-like (PK-like) 381 656 IPR011009 -
Mibi08g1813 673 Gene3D Phosphorylase Kinase; domain 1 375 469 - -
Mibi08g1813 673 PANTHER OS02G0152300 PROTEIN 18 668 - -
Mibi08g1813 673 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 370 469 - -
Mibi08g1813 673 MobiDBLite consensus disorder prediction 250 269 - -
Mibi08g1813 673 CDD STK_N 16 153 - -
Mibi08g1813 673 Gene3D HUPs 12 132 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1813 Mibi-ChrMibi08 34968072 34971511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1813 87 667 Receptor kinase-like Gene Family AT5G12000 59.609 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi08g1813 PK_Tyr_Ser-Thr 3.2e-40 CL0016