Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1803 ATGAGATTTTCTGCCTTCAATATTAACATCCATATGGTGGTTCATGTTGGTTTAAATTTATTCGAACCATCAAAGTCGAGGTTTGTGGCGGTTTTGGATTCTGGCTGCCGTGAGCGGAGGTCAGCGACGAAGAAGGGAAATGGATGGTTCTTTTCGAATACTAAAACTACAAATTTGATTGGGTGGATGTGGAATAGCCAGATTGGCATGCGCCTGGAGTCGCTTGAAAAGCAGAAAGGGGCAGAGATCTTAATTGCACTGACTCGGAAGATCCTTTGTCTCATAGTAATTTGGCTTTTTGTCTGCTTGAGTTCTCTCTGCAAGTTCGTTTCTTTATACCCAGAGATGGGTGCTTCTGGAAAATGGGTGAGATCATTAATCGGACTCAGGAAGTCTGATAAGGATGACCATGCCAAGGAGGGTGGTGGGAAGAGCAAGAAGTGGAGGTTATGGAGGAGTTCTTCTGGGGACATGTCTTCCTGGAAAGGTTTCAAAGGAAACCACAGAGCTGCCTCTGAGGGTTCTGATTCTCCTGTTGCTAATGCTTTCACAGCTGCAATGGCTACTGTGATTCGAGCTCCACCTAAGGATTTCAGACTTGTTAGGAAAGAATGGGCGGCAATAAGAATTCAAACTGCCTTTCGCGGTTTCTTGGCAAGAAGGGCTTTAAGGGCCTTGAAAGGAGTGGTAAGGCTTCAAGCTCTTGTGAGAGGTAGACAAGTGAGGAAGCAGGCAGCAGTTACGTTGAGGTGCATGCAGGCTCTGGTTCGTGTTCAAGCCAGAGTTAGGGCTCGTCGTGTTAGAATGTCATTAGAAGGGCAGGCTGTGCAAATGATGCTTAATGAACGTCGCACCAAGGATGATCTCTTGAAGCAAGCTGAGGAGGGATGGTGTGATAGTAAAGGAACTCTTGAAGATGTCAAAGCTAAGCTACATATGAGACAGGAAGGAGCCTTCAAGAGAGAGCGAGCAATTGCATATTCTCTTGTTCAGAAGCAATGGAGATCAACCCCATGTTCAAATGCAAGAACAAATATCTCTCTCAAGAACTTTGAGATCGACAAGTCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCCAAGCCATGGGAAACTAGATTGATGGAACAATCCCAATCTGAAGCCTGTAATAAAAGTAAAACCCCACCTCCTAGTAAGATTGTTGATTCCTTGGGAAACTCAAATTCAAAACCTTCGGAACAACAAGGCTTAGTCAAAGTCAGGAAGAACAATGTGAGCACAAGGATCTCAGCTAGGCCACCCATTGCAGGGCAAACCACACGATCATCTTCAAGTCCAAGTTCTGAATTTCGATATGATGAGAGCTCTGCTTCATCTTCCATTTGCACTTCCACAACACCAATATCTGGGAACACTATGTTGGCCTCTGAAAGGACAGAGGACAGCACAGTGAGTAGGCCAAGTTACATGAACCTGACCGAGTCAACCAAGGCAAAGCAAAAGGCATATAACAGAAGTCAAAGGCAGCAATCCATGGATGAGTTTCAGTTCCTTAAAAAGTCAGGGATTTTCTCAAATGCGGATTCCAAAAGCACCGCAGGTTCTGGTTCTGACCTTTCAATCAACTTCTCAAGGCCATTTTACCTACCAACCCACTTGGACAAGTGCTCAACAAAGGCAAGTTAA 1674 0.4516 MRFSAFNINIHMVVHVGLNLFEPSKSRFVAVLDSGCRERRSATKKGNGWFFSNTKTTNLIGWMWNSQIGMRLESLEKQKGAEILIALTRKILCLIVIWLFVCLSSLCKFVSLYPEMGASGKWVRSLIGLRKSDKDDHAKEGGGKSKKWRLWRSSSGDMSSWKGFKGNHRAASEGSDSPVANAFTAAMATVIRAPPKDFRLVRKEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSLEGQAVQMMLNERRTKDDLLKQAEEGWCDSKGTLEDVKAKLHMRQEGAFKRERAIAYSLVQKQWRSTPCSNARTNISLKNFEIDKSNWGWSWLERWMAAKPWETRLMEQSQSEACNKSKTPPPSKIVDSLGNSNSKPSEQQGLVKVRKNNVSTRISARPPIAGQTTRSSSSPSSEFRYDESSASSSICTSTTPISGNTMLASERTEDSTVSRPSYMNLTESTKAKQKAYNRSQRQQSMDEFQFLKKSGIFSNADSKSTAGSGSDLSINFSRPFYLPTHLDKCSTKAS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1803 557 Pfam IQ calmodulin-binding motif 205 224 IPR000048 GO:0005515
Mibi08g1803 557 PANTHER IQ-DOMAIN 5-RELATED 116 521 - -
Mibi08g1803 557 FunFam IQ-domain 11 202 253 - -
Mibi08g1803 557 MobiDBLite consensus disorder prediction 378 481 - -
Mibi08g1803 557 Gene3D - 201 252 - -
Mibi08g1803 557 ProSiteProfiles IQ motif profile. 203 231 IPR000048 GO:0005515
Mibi08g1803 557 SMART iq_5 225 246 IPR000048 GO:0005515
Mibi08g1803 557 SMART iq_5 202 224 IPR000048 GO:0005515
Mibi08g1803 557 ProSiteProfiles IQ motif profile. 227 254 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1803 Mibi-ChrMibi08 34853705 34859655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1803 116 551 IQD Protein Family AT2G26180 62.273 2.84e-154 446