Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1794 ATGACTCCTGTTGCTATGAACCCTCCAAGCCCTTTCCTTCTCAAGGATCAAATAGAAGATCAACACCACTCACTCTTCGTTTCTCCTCTTAATCATGATTCCTCTTCTAAATCTTCTCTCTCTTCACGTGCTAGTTTCTTCCACTTACTTGATCATACACAGACTAATAGAGAAACCAGCCGAGAGTTAAGACATGATGATCAAGAGGAACTAGTATTTCATGGTGGATCAAGCAGTCACCAAGTATGTTATTCATCCTTCAACAATTCACCCAAGCCTCAACAAGTTAATAAGGATGATCGAAGAAACATGTATGGCGGCTATAAAGAGGAGGAAGTTGAAGAAAGCAACAATAAAAGCAGTTACGAGTCTGTACAATGGATGCCTTCTAAGATGAGGCTGATGAAGAAGATGATGATCCACAATAATACTAGTCATGTCACTCACAAAGCATCAAATATCGTCGCTCCAAATATCCAAACTCGAGAGCACCACAAAACCCAAACCCAAAAAAGCCCTTCTCATAACCACAGGAACAACACCGCCACTAGGGTTTGTGCCGACTGCAACACAACCAGCACCCCACTCTGGAGGGGTGGCCCAAAGGGTCCCAAGTCACTTTGCAATGCTTGTGGGATTAGGCAGAGGAAGGCGAGAAGGGCATTGATGGCAGAAGCTGGAAATGGTGCAGTGAGTTGCAGACTGAATAGCAAGGAGAAGAAGGCTCGCACAAACCATTTTGTAGCATTCAAGAATAAGTGCAAGGTCACTACTGGTGGAAGCAGTGAAGAAGGAACATCTGAGAGAGAAAGGAACAAGAATAGTAATAATAATAATAATGTTGGGTTTAAAGATTTGGCATTTAGTTTCAGAAACAACGTGTCGGTGATTGAACAAATGTTTCCTCCCGCCGATGAAGTAGCTCAGGCGGCGCTGCTTCTCATGGACTTATCTTATGCTACTATTCCTATTTAG 975 0.4308 MTPVAMNPPSPFLLKDQIEDQHHSLFVSPLNHDSSSKSSLSSRASFFHLLDHTQTNRETSRELRHDDQEELVFHGGSSSHQVCYSSFNNSPKPQQVNKDDRRNMYGGYKEEEVEESNNKSSYESVQWMPSKMRLMKKMMIHNNTSHVTHKASNIVAPNIQTREHHKTQTQKSPSHNHRNNTATRVCADCNTTSTPLWRGGPKGPKSLCNACGIRQRKARRALMAEAGNGAVSCRLNSKEKKARTNHFVAFKNKCKVTTGGSSEEGTSERERNKNSNNNNNVGFKDLAFSFRNNVSVIEQMFPPADEVAQAALLLMDLSYATIPI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1794 324 CDD ZnF_GATA 185 217 IPR000679 GO:0006355|GO:0043565
Mibi08g1794 324 ProSitePatterns GATA-type zinc finger domain. 186 211 IPR000679 GO:0006355|GO:0043565
Mibi08g1794 324 Gene3D - 180 225 IPR013088 GO:0006355|GO:0008270
Mibi08g1794 324 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 320 - -
Mibi08g1794 324 Pfam GATA zinc finger 186 219 IPR000679 GO:0006355|GO:0043565
Mibi08g1794 324 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 179 228 - -
Mibi08g1794 324 ProSiteProfiles GATA-type zinc finger domain profile. 180 216 IPR000679 GO:0006355|GO:0043565
Mibi08g1794 324 SMART GATA_3 180 232 IPR000679 GO:0006355|GO:0043565
Mibi08g1794 324 MobiDBLite consensus disorder prediction 256 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1794 Mibi-ChrMibi08 34726164 34727915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1794 124 322 C2C2-Gata Transcription Factor Family AT4G26150 37.674 5.40e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi08g1794 GATA 7.2e-16 CL0167