Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1791 ATGTCCAAAATGAAGCATCTACTGCGAAAGCTTTATATTGGTGGTGGAATTAATGAACCCCACAGGTTACCTGATACCCGCCCAGTGATTACTCCAACTCCTATCCCTAATTTGCCATCATCATCTTCTTCGACGACTTTGGCATCGGACACAGTGGGCACAGTCCGGCCAAATGAATCGGTTGCTGATCGTACGGATATTGATGGCGCCGGTGGTGTATTTGGTGGCGATTTTAATTTATTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTGGCTATTAGCGCTTCCGATCCTGATGTACGTAAGGACCCTGAGTCTGCTCAGATCGATGCTGCCAAGCAGATGAGCCTAGGGAGCGCAGCTTCTATCACCGACACTGAAGCCCTCGTCCAGTTTCAATCGCTTCGATATTGGAACTATAATGTCATCGATTATGAGGAGAAAGTGAAGGATGGATTTTATGATTTACATGGATTTTCCTTAAATTTGACTGAACGAGGAAAGATGCCATTGTTGGTCGATCTGCAAACTGCTTCCCTCTCTGAAAATGTTGGTTGTGAGGTGATTCTGGTGAATCGTATGGTTGACATTAAGCTGAAACAGCTTGAGAAAAAAGCCTTTACTGTATCTAAGGACTGTTGCTTATCTGAACAAGGGCTAGTTTCAAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAACAGAATGGGTGGACCGGTTGGTGACCCTGATGAGATGATTAAAAAGTGGTCAGCTAGGAGTCACGAGTTACGTGATTCTTTGAAGACAATTGTTATTCCTCTCGGCTGTCTTGATGTTGGACTTTCTCGCCATCGAGCTCTACTGTTTAAGGTGATGGCTGATAGGATTAACGTTCCCTGTATGCTGGTCAAAGGGAGCCATTACACTGGAACCGATGATGGAGCTGTGAATTTGATTAGAGCTGATGATGGAAGTGAATACATCATTGATTTGATGGGTGCACCTGGTGCTCTTATTCCTACCGAGGTACCCAGTAGTCAGCTCAAAAACTACAGTTTTTCTGTAACAGGTGCTGAGATTGCAGAATTGCCTAATAACGCCCATCTCATACTTGATGGCGGAAATGGAGTGCTTGCAGTGTCGTCTGATATTGATAGAACTTCAACAGTGGGCTGGGCTCAGTCAGAACAAATATTGAAAGTAGACAGTCTAGGAACAATGGATGCAAGGAACCAAGGTGGAATAAATCAAACAGAAATATTTGAACATATGGGGAATCTTCTTCAGTCTACGCATATATCATGTGAAAGCACATCACATACAGAAGCTTCATCTGCAGAAAATATGCAAGTGCAAAATACGTCCAAGTATTCCCTTAGTGCAGCAAAGAACCCTGAATTTGCTCATAAACTGCAAGCTATCCCATTAGGGAGTGGTGCATTCCCCCTTCCTGATCTCTCTTCGGATATCATTAGACAACATACAAGTGGAAATGAATTTTATGAACAAATTCATCAACTTGATCGAAAAATTGTTGTTGGTGCTTTTCAGTCTGATCCAAGCTTTGAGAAGTCCCTCATATCTTCCCAACAGGTGTGCTCTGCCTGTGATGTTAGACTCTGTCAGTCTGCTGATTGGTTAGCTGAAAAGAAAGAAGAACTGGAGCAAAGTGACACCGTGCTTGAATATACAGGTCCTGTCAATTTGCTAAAGATGCAAGGAAAACAAGTTATTGGTTCTTCCTTGACCAAGGCAGCTGTTTCTTGCAAGAGGCAAGTTGAGGTTGAATCGGACTATGACGATGCAAATGATATTGATAATAAAGTTGGAATGGCTTTTAATTGCAATCAAAATGGGAATATTTCTGGTATTCAATTTAAAGAGGTAGATAATCGAGATAGCAGCCTGAATGATGGTAAAAGTGATATAGTTAAGTCAGTACTGGGTGAGGGCGCAGAATGGGAAATTCAATGGGAGGATCTTCATATTGGTGAACGTATTGGTATAGGTTCTTATGGTGAGGTTTACCATGCTGACTGGAAGGGCACTGAAGTTGCTGTGAAGAAGTTTCTGAACCAAGACTTCTCTGGTGACGCATTAACTCAGTTCAGATCTGAAGTTGAGATCATGTTGAGGCTGCGGCATCCGAATGTTGTACTTTTCATGGGAGCTATTGCTCGGCCACCACATTTTTCTATATTGACAGAGTTTCTTCCAAGAGGGAGTTTATATAGGCTATTGCATCGACCCAATTTTGAACTTGATGAGAAGAGGAGGTTGCAAATGGCTCTTGATGTGGCCAAGGGTATGAATTACTTGCACACAAGCCATCCTCCTGTTGTTCATCGGGATCTGAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTGGTTAAGGTTTGTGATTTTGGTTTGTCACGCATGAAGCACCATACCTTTTTGTCCTCAAAATCTTCTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTATTAAGAAACGAACCAGCCAATGAAAAGTGTGATGTGTATAGTTTTGGTGTGATTTTGTGGGAATTGGCTACTGCAAGGATCCCATGGAAAGGATTGAACCCGATGCAGGTTGTTGGCGCTGTTGGATTCCAAAATAGACGACTTGAAATTCCTGAAGATGTTGATCCAGTGGTAGCACAAATAATACGTGACTGCTGGCAAATGGAGCCACACCTGCGGCCATCATTCTCACAGCTGATGTCTCGTCTCCGCGGTCTTCAACACCTGGTTGTGGAAGATGGGAGCTCATCGCAATAA 2772 0.4315 MSKMKHLLRKLYIGGGINEPHRLPDTRPVITPTPIPNLPSSSSSTTLASDTVGTVRPNESVADRTDIDGAGGVFGGDFNLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGSAASITDTEALVQFQSLRYWNYNVIDYEEKVKDGFYDLHGFSLNLTERGKMPLLVDLQTASLSENVGCEVILVNRMVDIKLKQLEKKAFTVSKDCCLSEQGLVSSGLLQKLADIVVNRMGGPVGDPDEMIKKWSARSHELRDSLKTIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSHYTGTDDGAVNLIRADDGSEYIIDLMGAPGALIPTEVPSSQLKNYSFSVTGAEIAELPNNAHLILDGGNGVLAVSSDIDRTSTVGWAQSEQILKVDSLGTMDARNQGGINQTEIFEHMGNLLQSTHISCESTSHTEASSAENMQVQNTSKYSLSAAKNPEFAHKLQAIPLGSGAFPLPDLSSDIIRQHTSGNEFYEQIHQLDRKIVVGAFQSDPSFEKSLISSQQVCSACDVRLCQSADWLAEKKEELEQSDTVLEYTGPVNLLKMQGKQVIGSSLTKAAVSCKRQVEVESDYDDANDIDNKVGMAFNCNQNGNISGIQFKEVDNRDSSLNDGKSDIVKSVLGEGAEWEIQWEDLHIGERIGIGSYGEVYHADWKGTEVAVKKFLNQDFSGDALTQFRSEVEIMLRLRHPNVVLFMGAIARPPHFSILTEFLPRGSLYRLLHRPNFELDEKRRLQMALDVAKGMNYLHTSHPPVVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVAQIIRDCWQMEPHLRPSFSQLMSRLRGLQHLVVEDGSSSQ 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1791 923 MobiDBLite consensus disorder prediction 36 53 - -
Mibi08g1791 923 CDD STKc_MAP3K-like 662 908 - -
Mibi08g1791 923 FunFam Serine/threonine-protein kinase isoform 1 647 734 - -
Mibi08g1791 923 SUPERFAMILY Protein kinase-like (PK-like) 646 907 IPR011009 -
Mibi08g1791 923 Pfam Protein tyrosine and serine/threonine kinase 656 908 IPR001245 GO:0004672|GO:0006468
Mibi08g1791 923 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Mibi08g1791 923 MobiDBLite consensus disorder prediction 33 53 - -
Mibi08g1791 923 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 159 915 - -
Mibi08g1791 923 SMART serkin_6 656 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1791 923 ProSiteProfiles Protein kinase domain profile. 656 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1791 923 FunFam Serine/threonine-protein kinase CTR1 735 918 - -
Mibi08g1791 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Mibi08g1791 923 Pfam Ethylene-responsive protein kinase Le-CTR1 131 334 - -
Mibi08g1791 923 Gene3D Transferase(Phosphotransferase) domain 1 735 918 - -
Mibi08g1791 923 Gene3D Phosphorylase Kinase; domain 1 649 733 - -
Mibi08g1791 923 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Mibi08g1791 923 PRINTS Tyrosine kinase catalytic domain signature 816 826 IPR001245 GO:0004672|GO:0006468
Mibi08g1791 923 PRINTS Tyrosine kinase catalytic domain signature 730 743 IPR001245 GO:0004672|GO:0006468
Mibi08g1791 923 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Mibi08g1791 923 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1791 Mibi-ChrMibi08 34701329 34711104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1791 1 922 MAP Kinase Kinase Kinase AT5G11850 54.699 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi08g1791 PK_Tyr_Ser-Thr 4e-65 CL0016