Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1788 ATGGGTAGGAAATGCTCATATTGTGGAAACCTTGGTCACAATTCTAGAACTTGTAATATTGTTCAGAGAGGTGGAGGCCTCAAGATCTTTGGAGTCCAATTTATTGATCCTTCACCTCCTCTTCTTCCTCCTCTTATGTCTTCTTCACCTACTAATAATAATTACAGTAACGGCATTGGCGGCATCAAAAGAAGAAGTTTCAGCATGGACTCCTTTTTGCCTTCTTCCCAAAACACCTTCATATCAACTACATCTTCCTCTTCCTCCTGCGACAATAATTCACATCACAAAATGTCTGATACTTATGATTTAGCCGCCAGAACAGCCCAAGAAAGGAAGAATAAAGGAGTGGCGTGGACGGAGGAGGAGCACGAGACATTTCTGAAGGGGCTGAATAAGTTGGGGAAGGGAGACTGGAGAGGCATCTCTAAGAACTATGTGACAACAAGAACACCAACCCAAGTGGCCAGTCATGCCCAAAAATATTTCCTCCGTCTCAATCATCACTCCAATCATAAAAGAAAGCGTTATCAAACCCTCCTTCATGAAGAGGGACAAAATAATAACACAGTGGACGCAGTAACAAATTATTCTTTCTTTTCTAAGCCCATTATTGAAGCTGTTGGTGCATCTGATGATGAGACTATGAAGATGGATGTGGGTGGAAGCAACCAAGCCAATAATAGCAAAAGGATTTGTCTCTCTCGGTGGCTTTCAAGTTATCATTCAATGCTTAATAATTGGTCTGCCTCTTCAGCAAAGTACGCCGCTCTTCACAGCTTAGAACCAGATTTAGAACTCAAACTAGCTTCTCCAAACTTTCTTTAA 828 0.4167 MGRKCSYCGNLGHNSRTCNIVQRGGGLKIFGVQFIDPSPPLLPPLMSSSPTNNNYSNGIGGIKRRSFSMDSFLPSSQNTFISTTSSSSSCDNNSHHKMSDTYDLAARTAQERKNKGVAWTEEEHETFLKGLNKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRLNHHSNHKRKRYQTLLHEEGQNNNTVDAVTNYSFFSKPIIEAVGASDDETMKMDVGGSNQANNSKRICLSRWLSSYHSMLNNWSASSAKYAALHSLEPDLELKLASPNFL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1788 275 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 114 165 IPR006447 GO:0003677
Mibi08g1788 275 Pfam Myb-like DNA-binding domain 118 163 IPR001005 -
Mibi08g1788 275 ProSiteProfiles Myb-like domain profile. 111 163 IPR001005 -
Mibi08g1788 275 FunFam transcription factor MYB1R1 117 168 - -
Mibi08g1788 275 Gene3D - 117 168 - -
Mibi08g1788 275 PANTHER TRANSCRIPTION FACTOR KUA1 3 203 - -
Mibi08g1788 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 167 IPR017930 -
Mibi08g1788 275 SUPERFAMILY Homeodomain-like 113 168 IPR009057 -
Mibi08g1788 275 ProSiteProfiles SANT domain profile. 119 167 IPR017884 -
Mibi08g1788 275 SMART sant 115 165 IPR001005 -
Mibi08g1788 275 CDD SANT 118 163 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1788 Mibi-ChrMibi08 34682267 34683288 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi08g1788 Myb_DNA-binding 5.7e-13 CL0123