Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1786 ATGGAGAATGGTATGTTTGGTGCTCCAATGGACATGGCTGGTCAAAGTTCCTCTGTCTTAGATGAAATTCCACAAACAGAAAATCCACTCATTCAAGGCTATTCATTTGACCAAACACGCATCATGAATGGAATCTCAATGCTTGCTGGAATGCAAGGTGAAGAATTCCTAAGTAATAATGTCCATTTCGATGTTCCTCTAATGAATCCTTCCTGCATTGTTGATCCAAGTTCCTTGGTTCCATCTAAAGGAATGAAAATTCTGGTAGATGCCCCACTCGGAAACAACGCTGTAGTTCAAGATCAACAAGCTGGAGGCACAATCACTCCTGCTTCACTTTCTGCCATTCCTGCTGCAAGATTTGGTCTTCAAGAAAACTTAGAGAAATCAACACCTTTGTCTCCTTCACTCTGTTCACTAGAGGCACTGGCACCATATATACTAAACAATTGGCAGGACAATTCAAACACTGTGCTTTCAACTTTTGGAGATCGTATGTATGATGAAGTATTACCTGGTACTAGGTTCCATGCTTATCCGTCCACATCAAACCTGGATCCAAATGGATGGACACCTTCAAATGCTGCAAATTTAACCCATCATGGTTATGATTACCCAAACTTCATGAATGAGCTCTCATTAAGTCTAGCAACATCTCCCACCACAGGTCAGTGCTCTGAGGTGAGTTCTGATAGCTTGGAACAAGCCTCTTGTAGCAGTAAGGGGGTTACAGGTAATTTGGGTACCCATAGACATGTGAATTTTTCACAAGCAATATTGGGGTCTAGATATCTTACTGGTATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCAGTTGAAATTACGGAGAAGATAAATTTTTCAGCTTCCGCTAGTTGTAGTAGAGCCAGAGCAGAAGGGAACACATTAACCTCAGTTCTTCCATCTGGGAGAATGATAGAGATAACAAATCACAATGCAGATTCAATGTTTGATGCCCCGGTGAATGCTTCATTTTCATTACATGATGCTTCTGAATCAAAAAAATCCCAGCTTCTGACACTTTTACAGATGGTGGACAGTCGGTATAATCAGTGTTTGGATGAGATACATACTGTTGTATCCGCATTTCATGCTGCCACAGAGTTGGACCCACAGGTTCATGCACATTTTGCCCTCCACACAATCTCAATGCTGTACAAGGATTTGCGTGACAGGATAAGCAATTATATCATTTCCATGGGAGAAATATTCAACAACTCACGCTCAGAAGAAGAAGATAAGGAAAGGTCCACGGAAGCTTTATTCATAGAGAAGCACTGGGCTCTGCAGCAATTCAAAAGAAAAGAGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAACGATCTGTCTCTGTTCTAAGAACTTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAATTACTTGCAGTAAAAAGTGGATTGACTAGAAGTCAGGTATCAAACTGGTTCATTAATGCTCGTGTAAGGCTGTGGAAACCGTTGATTGAGGAAATGTACGCAGAAATGAACAGAAGAAAGGCTATTAGGAATGAAGAAGGCAGGCAGGGCAGCCCAAGAAGCAGCGGGGTACACTTGAGCAATCAAAGATTTGCTATCAATTCATAA 1650 0.4158 MENGMFGAPMDMAGQSSSVLDEIPQTENPLIQGYSFDQTRIMNGISMLAGMQGEEFLSNNVHFDVPLMNPSCIVDPSSLVPSKGMKILVDAPLGNNAVVQDQQAGGTITPASLSAIPAARFGLQENLEKSTPLSPSLCSLEALAPYILNNWQDNSNTVLSTFGDRMYDEVLPGTRFHAYPSTSNLDPNGWTPSNAANLTHHGYDYPNFMNELSLSLATSPTTGQCSEVSSDSLEQASCSSKGVTGNLGTHRHVNFSQAILGSRYLTGIQEILAQIARYSVEITEKINFSASASCSRARAEGNTLTSVLPSGRMIEITNHNADSMFDAPVNASFSLHDASESKKSQLLTLLQMVDSRYNQCLDEIHTVVSAFHAATELDPQVHAHFALHTISMLYKDLRDRISNYIISMGEIFNNSRSEEEDKERSTEALFIEKHWALQQFKRKEHQLWRPQRGLPERSVSVLRTWMFQNFLHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRKAIRNEEGRQGSPRSSGVHLSNQRFAINS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1786 549 CDD homeodomain 448 508 IPR001356 GO:0003677
Mibi08g1786 549 MobiDBLite consensus disorder prediction 525 549 - -
Mibi08g1786 549 Gene3D - 451 529 - -
Mibi08g1786 549 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 195 527 - -
Mibi08g1786 549 ProSiteProfiles 'Homeobox' domain profile. 445 508 IPR001356 GO:0003677
Mibi08g1786 549 SUPERFAMILY Homeodomain-like 450 517 IPR009057 -
Mibi08g1786 549 SMART HOX_1 448 512 IPR001356 GO:0003677
Mibi08g1786 549 MobiDBLite consensus disorder prediction 529 549 - -
Mibi08g1786 549 SMART prehox3 253 403 IPR006563 -
Mibi08g1786 549 Coils Coil 546 549 - -
Mibi08g1786 549 Pfam Associated with HOX 259 402 IPR006563 -
Mibi08g1786 549 Pfam Homeobox KN domain 465 504 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1786 Mibi-ChrMibi08 34654730 34656668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1786 204 521 Homeobox Transcription Factor Family AT4G32980 53.799 4.45e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi08g1786 POX 4.3e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1786 08 34654730 34656668 Mibi08g1786 08 34654730 34656668 ECH