Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1770 ATGGGAAGAGCTCCTTGCTGTGACAAAACCAGTGTTAAGAGAGGACCTTGGTCTCCTGAAGAAGATGACACTCTCAGAACTTATGTTCAAACTCATGGCACTGGTGGTAATTGGATCACATTGCCCCGTAAAGCAGGCCTACGGAGATGTGGAAAGAGTTGCCGTCTACGGTGGCTCAATTATCTCAGGCCAGACATCAAACATGGAGGCTTTACTGAAGAAGAAGACACCATCATTTGTACCCTTTACGCCCAAATGGGAAGCAGATGGTCTGCCATAGCCTCTCAGCTTCCTGGTAGAACAGACAATGATGTGAAAAACTACTGGAACACCAAGTTAAAGAAGAAGCTAATGTCAGGAAGAGTTAACCTCAAAACAGTCACTGACACTCCCACTATTAATCATAATGTTCAAATCCAAATCCAGAGCCAAAATCCAGATTTCCCTGCTTCAAAAAACCAAACTTTATCATCTTCCCCATCAACTCTGCCAATCCTGACAGACCCCAATTCTGGGTTTCAACATACCATGATCAGTTTTGACCCGACTCAATTATACAGTCCAGGGTTCATAGATGTCTCAGAAATCAACGCAAGTTCAGGCATGATGTCTTTGTCTCAGGATGGTTCCAGCATTTCAGATTCATCTTTGATTGCAACAGAAAACAAATGTTTGTCACTGCCTGAGAAAATTGCTGATGAAGCAACTCAGGTGTTGATGAACTATGGGTTTGGTGGTTATCATCTTCACTCTGACCTTGTCAATGATGGCTTTTACTCCCAAGAGAAAATTGGTGAATTTGCTTCTTCAAGTTTCTATCCTCATGAGTTGCTTGATTTTGGCTATGCTGACATGAAGCCACAAGGACGAGATTGA 876 0.4281 MGRAPCCDKTSVKRGPWSPEEDDTLRTYVQTHGTGGNWITLPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDTIICTLYAQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMSGRVNLKTVTDTPTINHNVQIQIQSQNPDFPASKNQTLSSSPSTLPILTDPNSGFQHTMISFDPTQLYSPGFIDVSEINASSGMMSLSQDGSSISDSSLIATENKCLSLPEKIADEATQVLMNYGFGGYHLHSDLVNDGFYSQEKIGEFASSSFYPHELLDFGYADMKPQGRD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1770 291 FunFam Transcription factor RAX3 70 136 - -
Mibi08g1770 291 CDD SANT 71 113 IPR001005 -
Mibi08g1770 291 Gene3D - 7 68 - -
Mibi08g1770 291 SMART sant 67 115 IPR001005 -
Mibi08g1770 291 SMART sant 13 64 IPR001005 -
Mibi08g1770 291 CDD SANT 16 62 IPR001005 -
Mibi08g1770 291 PANTHER OS09G0431300 PROTEIN 1 209 - -
Mibi08g1770 291 FunFam Transcription factor RAX3 7 68 - -
Mibi08g1770 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi08g1770 291 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi08g1770 291 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi08g1770 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mibi08g1770 291 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi08g1770 291 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi08g1770 291 MobiDBLite consensus disorder prediction 1 21 - -
Mibi08g1770 291 Gene3D - 70 140 - -
Mibi08g1770 291 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1770 Mibi-ChrMibi08 34554417 34555739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1770 1 119 MYB Transcription Factor Family AT4G37780 74.790 3.89e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1770 Myb_DNA-binding 2.1e-13 CL0123