Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1766 | ATGGGTCTTGCCGAAATGTGTAACGCAGGTCTGGGGCTTGGTCTTGGCCTTGGTCTTCACCACAACCAGTCAGAGAATTGCTGCACAGGAATCGCACACATGAAGAAACAGGATGATCCGTACAAATGTGAGCAGAAGGTACTATACCCTTCTCTTACGTTAGGGCCACCGCCAGATGATGATCAACAGCTTCTTCTTCCTATGAAGACTGAATCTATTCATAATAACTTGCATGCAATAGCCTCTTCCAATTCTCACAGCGCCGCCTCTTCCTTCTCCAACTCCTCCAGCGTCAAGAGGGAGAATAAGGACTTTTTGGGAGACGACCTTGACTTGGAAGTTGAGAATAATAATAAGGTTAATCCTTCCAAGGTATTAGGCCTCGACATAGACGAGGAGGGTAATCCCAGGAAGAAACTTAGGCTCACCAAAGACCAATCCGCTGTTTTAGAGGACAGCTTCAAAGAGCACTCCACTCTCAATCCCAAGCAAAAGCAAGAATTGGCGAGGAAGTTAAACCTGCGTGCGAGACAAGTAGAGGTTTGGTTTCAAAACAGGAGAGCTAGGACAAAACTGAAACAAACGGAAGTTGACTGTGAGTTGCTTAAAAAGTGCTGTGAAACACTGACGGAAGAGAACAAGAGATTACAAAAGGAATTGCAAGAACTCAGATCGATCAAAACGACGTCGCAGCAGGGTCCCTTGTATATGCAACTTCCGGCGGCCACCCTTACTTTATGCCCTTCTTGTGAGAGAATCTGCAGCGGAGCTGGTGGCGGCGCCACCGTCAGTGGCTCTCCGGCCACCACCGCCTTCATCATCGGATCAAAGGCCCATCACTTGTACAAAAGCAACTATCCATTCACACACTCATCCGCAGCTTGTTAA | 888 | 0.4764 | MGLAEMCNAGLGLGLGLGLHHNQSENCCTGIAHMKKQDDPYKCEQKVLYPSLTLGPPPDDDQQLLLPMKTESIHNNLHAIASSNSHSAASSFSNSSSVKRENKDFLGDDLDLEVENNNKVNPSKVLGLDIDEEGNPRKKLRLTKDQSAVLEDSFKEHSTLNPKQKQELARKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELRSIKTTSQQGPLYMQLPAATLTLCPSCERICSGAGGGATVSGSPATTAFIIGSKAHHLYKSNYPFTHSSAAC | 295 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1766 | 295 | Coils | Coil | 199 | 229 | - | - | |
| Mibi08g1766 | 295 | Pfam | Homeodomain | 137 | 191 | IPR001356 | GO:0003677 | |
| Mibi08g1766 | 295 | SUPERFAMILY | Homeodomain-like | 135 | 201 | IPR009057 | - | |
| Mibi08g1766 | 295 | SMART | HOX_1 | 135 | 197 | IPR001356 | GO:0003677 | |
| Mibi08g1766 | 295 | FunFam | Homeobox-leucine zipper protein 18 | 123 | 198 | - | - | |
| Mibi08g1766 | 295 | ProSitePatterns | 'Homeobox' domain signature. | 168 | 191 | IPR017970 | GO:0000981|GO:0006355 | |
| Mibi08g1766 | 295 | CDD | homeodomain | 136 | 194 | IPR001356 | GO:0003677 | |
| Mibi08g1766 | 295 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 13 | 261 | - | - | |
| Mibi08g1766 | 295 | SMART | halz | 193 | 239 | IPR003106 | GO:0006355|GO:0043565 | |
| Mibi08g1766 | 295 | Pfam | Homeobox associated leucine zipper | 193 | 225 | IPR003106 | GO:0006355|GO:0043565 | |
| Mibi08g1766 | 295 | Gene3D | - | 130 | 198 | - | - | |
| Mibi08g1766 | 295 | ProSiteProfiles | 'Homeobox' domain profile. | 133 | 193 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1766 | Mibi-ChrMibi08 | 34449939 | 34451090 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1766 | 1 | 295 | Homeobox Transcription Factor Family | AT4G37790 | 50.498 | 1.65e-70 | 218 |
Transcription factors information