Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1757 ATGGGTGGTCATCATGAAAATGCCATGGGGTTTCAACATGGACAAGAGACAATCCTGAATTGCACTTCAACTGCTTTGAGCAACAATGTTTCTGAAATTGCTATTAGCTCTGTGTCTATGGCCAAGAATCCTTTTCTTGGGTCTTCTTCTTCCACCTGGGATCCTCTTGCTTCCCTGAGTCAGACTCAAACTTTTGGAGGATCTTCCATGGTTTCTCACGGTGAGTTCGGAAGTTCATCTTACCCTCTTGTGTTGGAAAATCAGGGAATGAGCAGCAACTCTCACCTTGTTCAATATATGTCCGAATCTAATTTCGCTATACCTTCCTATGCAAGTGGAAGTTTCTCCGAAATGGTTGGCACTTTTCCCCAACATGGGTGTTCTGATTTAGCTAATACAAGGTATGGCCCAAGTTATAACCAAAATGAGGAGGCAGCCATGAAAAGGGCTCCATTAAATGGGTCACAATCTCAGCTTGAGGATCCAACTCCTGAAGAAGGAGCCACAGTATCTGCACATAATGCAAGTAGAAGAAAACGTGGGCTTGATCACAATCCTACGTTCAGTCCAAACAAGAATGCTGAAGTGGAACCAATGAAGGATTCTTCTGGGAAGAGCTCTGATGGGGCAAAAGAACATGATGAGAAGAAACAAAAGGTTGAGCAAAGCAATACTATTGCGGATTTGCGTGGTAAGCAATCATCAAAGCAAGCCAAAGACAACTCCCAAAGTGGAGAAGCTCCCAAAGAGAATTTCATTCATGTGAGGGCTCGAAGAGGTCAAGCTACCAACAGTCATAGCCTTGCAGAAAGGGTAAGAAGAGAGAAAATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCTGTAATGCTGGATGAGATTATTAACTATGTGCAATCGCTGCAGCAACAGGTTGAGTTTTTGTCGATGAAACTTGCCACCGTGAATCCTGAACTGAATTTTGATGTAGAACGGATCCTATCCAAAGATATTCTTCAGTCGCGCATCGCAAATGGGACTATTGGTGGATATGGTATGAACTCCTCTCACTCGTTCCCTAGTGGAAGTTTTCAGGGAACTCTTCCAGGACCAGGCATACCTAACACATCACCACCATTCCCTCCTTTGCCTCAGAGTGTTTTGGAGCATGAGTTCCAAAACTTGTATGGAATGGGATACGATTCCAGTACAGCTCTTGACAATGCTGGGCCCAGTGGGAGGTTGAAAACGGAGTTGTAA 1269 0.4421 MGGHHENAMGFQHGQETILNCTSTALSNNVSEIAISSVSMAKNPFLGSSSSTWDPLASLSQTQTFGGSSMVSHGEFGSSSYPLVLENQGMSSNSHLVQYMSESNFAIPSYASGSFSEMVGTFPQHGCSDLANTRYGPSYNQNEEAAMKRAPLNGSQSQLEDPTPEEGATVSAHNASRRKRGLDHNPTFSPNKNAEVEPMKDSSGKSSDGAKEHDEKKQKVEQSNTIADLRGKQSSKQAKDNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGTIGGYGMNSSHSFPSGSFQGTLPGPGIPNTSPPFPPLPQSVLEHEFQNLYGMGYDSSTALDNAGPSGRLKTEL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1757 422 CDD bHLH_AtBPE_like 251 336 - -
Mibi08g1757 422 Gene3D - 258 332 IPR036638 GO:0046983
Mibi08g1757 422 Pfam Helix-loop-helix DNA-binding domain 264 312 IPR011598 GO:0046983
Mibi08g1757 422 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 156 357 IPR024097 GO:0006355
Mibi08g1757 422 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 261 311 IPR011598 GO:0046983
Mibi08g1757 422 FunFam Basic helix-loop-helix transcription factor 258 330 - -
Mibi08g1757 422 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 259 329 IPR036638 GO:0046983
Mibi08g1757 422 SMART finulus 267 317 IPR011598 GO:0046983
Mibi08g1757 422 MobiDBLite consensus disorder prediction 224 248 - -
Mibi08g1757 422 MobiDBLite consensus disorder prediction 150 251 - -
Mibi08g1757 422 MobiDBLite consensus disorder prediction 198 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1757 Mibi-ChrMibi08 34323752 34325915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1757 1 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.958 8.47e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g1757 HLH 4.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1757 08 34323752 34325915 Mibi08g1757 08 34323752 34325915 ECH