Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1756 ATGAATGATAGCAGCACCAACAACAACAACAACGATGGGAGTGAGAATGAAAATCATAGTAATAATCAAAACTGGTTGGGGTTTTCTCTTTCACCCCACATGAAGATGGAGCTTCCTTCTCCCCCTCCCCTCCATCACCACCACCATCCTTCTGCCTCTGTTCCCACTTCCTTCTGTTTGTCTCCTTCTCACCTCACCACTTACGGAATTTGTTATGGAGCACCGGAGAACACAGGATTCCATTCTCCATTAACTGTCATGCCTCTTAAATCCGACGGCTCTCTTTGCATCATGGAAGCTCTCACCAGATCACAAACTCAAGTGATGATGCCGAATTCGTCACCGAAACTGGAGGATTTTCTAGGTGGTGCTACTATGGGGGGTCATGATGCAATGTCTTTGAGCCTAGACAGTAGTACTTACTATGCAACTCAGAATGCAGAGAGTCATCAACCTCACAGAGATCATTCTCTTGACTTTCTTTCTGAGCCTTTCAGGCAACAAGACCCCATTCATGTGCACCCTCAACATCCTACTTATTATCCTGCAATTTCTTGCCATCCTCCTATTTATCCATCGCCGCCATTGGAACAACAACAAAACAAGGACCCCCAAATGCAACAAATGTCGTCCGAGGAAGGCATGGCTTGTCTGAAAAACTGGGCTGCTCATCAACAAGGTTTACAGCAGAAGAAAAATGGAAGCTTGACGGAGGAAGAAGGTGGAGCTTCTGGTTCAGTTGGTAAAGTTGGATGTGGAGATTTTCAGTCCCTTGGATTATCTGTTAGCCCGGGCTCACAGTCTAGCTGTATCACTGCGCCGCAGCAGATTTCTCCTCCTGCGTCTGAGGTGGTTGCAATGGAGGCCAAGAAGAGAGGTGCTGTGAAGTTGGGCCAGAAACAGCCTGTGCACAGGAAATCAATTGATACTTTTGGCCAGAGAACTTCTCAATACCGTGGTGTCACAAGGCATAGATGGACTGGTAGATACGAAGCGCATTTATGGGATAATAGTTGTAAAAAGGAAGGGCAGACGAGGAAAGGAAGACAAGGGGGATATGATATGGAAGAGAAAGCTGCGAAAGCCTATGATCTTGCAGCGCTCAAGTACTGGGGACCTTCAACCCATATTAACTTTCCGTTGGAAAAATACCAGAAGGAACTGGAAGAAATGAAGAACATGAGCAGGCAAGAGTACGTTGCCCACTTGAGGAGAAAAAGCAGTGGTTTTTCCAGAGGGGCTTCAATATATAGAGGAGTTACAAGGCATCACCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGAAACAAGGATCTTTATCTTGGAACATTCAGCACTCAGGAGGAAGCAGCTGAAGCATATGACATAGCTGCAATCAAATTCCGAGGTGTGAATGCAGTGACCAACTTTGACATATCAAGGTACGATGTGGAAAGAATCATGGCCAGCAATACCCTTCTAGCCGGCGACATGGCCAGGCGAAACAAAGACGGCGAACCGAGAATGGAAGCAATAGAGTACAATGTAGTAACATCAAACCACCAGAGCAATGTTGAACCGGTTCAACAATCCCAAAGGAACAACAACAACAACAACGAGAGCGGTTCAGAATGGAAAATGCTATATCCTTCACCGAATAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAGGAATACAGCCATTTCTGTGGCCCTACAAGATCTCATTGGGATTGACTCAGCTAACTCGGGTCAGGGCATGCTGGAAGATACTACAAAGATAGGGACTCTTTTTTCAAACCCATCCTCGTTGGTCACCAGCCTTAGCAGCTCAAGGGAGGAAAGCCCGGATAAAACGGGCCCCACCATTCTGTTTCCTAAACCTCCTCCTACAATAGGTTCAAAAATTGTTAGCCCCATGGGTGGTAGCAATGGAGTTAGTTCATGGTTTCCTACAGGAGCATCTCAGAATTTGAGGCCTGGTTCTGCACTTTCAATGTCTCACTTGCCAGTTTTTGCTGCTTGGAGTGATAGTTGA 2031 0.4623 MNDSSTNNNNNDGSENENHSNNQNWLGFSLSPHMKMELPSPPPLHHHHHPSASVPTSFCLSPSHLTTYGICYGAPENTGFHSPLTVMPLKSDGSLCIMEALTRSQTQVMMPNSSPKLEDFLGGATMGGHDAMSLSLDSSTYYATQNAESHQPHRDHSLDFLSEPFRQQDPIHVHPQHPTYYPAISCHPPIYPSPPLEQQQNKDPQMQQMSSEEGMACLKNWAAHQQGLQQKKNGSLTEEEGGASGSVGKVGCGDFQSLGLSVSPGSQSSCITAPQQISPPASEVVAMEAKKRGAVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAAKAYDLAALKYWGPSTHINFPLEKYQKELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGDMARRNKDGEPRMEAIEYNVVTSNHQSNVEPVQQSQRNNNNNNESGSEWKMLYPSPNSCEQKTVNCGNYRNTAISVALQDLIGIDSANSGQGMLEDTTKIGTLFSNPSSLVTSLSSSREESPDKTGPTILFPKPPPTIGSKIVSPMGGSNGVSSWFPTGASQNLRPGSALSMSHLPVFAAWSDS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1756 676 SUPERFAMILY DNA-binding domain 316 381 IPR016177 GO:0003677
Mibi08g1756 676 CDD AP2 316 380 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 SMART rav1_2 317 386 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 SMART rav1_2 416 480 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 FunFam AP2-like ethylene-responsive transcription factor ANT 316 382 - -
Mibi08g1756 676 Coils Coil 381 401 - -
Mibi08g1756 676 CDD AP2 415 476 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 FunFam AP2-like ethylene-responsive transcription factor 415 476 - -
Mibi08g1756 676 Gene3D AP2/ERF domain 416 476 IPR036955 GO:0003700|GO:0006355
Mibi08g1756 676 Gene3D AP2/ERF domain 316 382 IPR036955 GO:0003700|GO:0006355
Mibi08g1756 676 ProSiteProfiles AP2/ERF domain profile. 317 380 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 MobiDBLite consensus disorder prediction 1 29 - -
Mibi08g1756 676 ProSiteProfiles AP2/ERF domain profile. 416 474 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 PRINTS Ethylene responsive element binding protein signature 456 476 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 PRINTS Ethylene responsive element binding protein signature 318 329 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 108 549 - -
Mibi08g1756 676 MobiDBLite consensus disorder prediction 1 53 - -
Mibi08g1756 676 SUPERFAMILY DNA-binding domain 415 476 IPR016177 GO:0003677
Mibi08g1756 676 MobiDBLite consensus disorder prediction 516 542 - -
Mibi08g1756 676 MobiDBLite consensus disorder prediction 604 628 - -
Mibi08g1756 676 Pfam AP2 domain 416 466 IPR001471 GO:0003700|GO:0006355
Mibi08g1756 676 Pfam AP2 domain 317 372 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1756 Mibi-ChrMibi08 34299351 34302504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1756 14 500 AP2-EREBP Transcription Factor Family AT4G37750 52.762 8.86e-160 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi08g1756 AP2 7.1e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1756 08 34299351 34302504 Mibi08g1756 08 34299351 34302504 ECH