Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1751 ATGCTGCTTCACCAAAGAAACTCTTTGCTGAGATCTAATAATACTTCTCCCTTTTCTGATTCTCAAATGCTCACTTTCTCTTCTCCCAAATCGGAGTCTCAGTTCACGGACAAGGCCTCCCCGAATGCCGCATTGCCTTTTTCTTATCATCAACTAGCTGCTTACTCCAGAAATACAGGTTACGGCTCTGGAGGCATGCACGGGGTTTTAACAGCAACAAGAGGGCCATTCACTCCGTCGCAATGGATGGAGCTTGAACATCAGGCCTTGATCTACAAGTACATCACTGCAAATATGGCCGTACCTTCTCATCTCCTCATCCCTATCAGAAAGGCTCTCGATTCTGCTGGCTTCGGTACCTTTTCCAACGGCCTTCTGAGACCCACTACACTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAACCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCTAGAGATGCCGTTGTGGACCAAAAGTACTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCCCCCGCCACCACTACCAACACTAATGCCTCAAAGCTTATCCCTAATGCTTCCTCTTCTGCTGCCTCTGTAGTGGTGCCAGGCGATGCTGCTTCCAATACCCTTTCCTTTACCCATCATCATCATCACCATCACCATCAATCCAAGAATTTGCAGCCTCTTTCCTCTCATACTTCTGCTCCTACCAACATCGACAGAATGTTTATGAACAACAAGGACAATGCTAGTGAGAGAGTGCAGGATGGTTCTGCTCTTCCGATGCTGCCTCCCACCCTTGATCTGAAGCCCAAGGAAAACCCCTTTATGATGCAAAAAGAGCAAATCTCATATGAAGAATCGTCAAGGAATGAGTTTGGGCTTGTTACTTCTGACTCCCTACTTAACCCTTCTCATAAAGGCTTTGGTTCTTCACAGAACCCCTCTTACAGAGACGCAGAGTCACAGCAATCCCTTCGTCATTTCATGGATGACTGGCCCAAGCTTGACATGCAATCAGATAGGACTCAGCTTTCTATATCTATCCCCATGGCCCCCTCAAATTTCATGTCATCCACTTCCTCTCCTACCAATGAGAAAGTCACATTGTCACCTCTTCGACTGTCAAGGGAGCTAGATCCAATTCAAATGGGTTTGGGGGTGGGAATTGGTCTGAATGAATCAAGTAATAGGCAGGCAAATTGGATTCCAATTGCCTGGGAAAATTCCATGGGAGGTCCTCTTGGTGAGGTTCTTCATCTTAGCAACAATACAAGTGATTGCTCCAAGAACTCATCTCTTAACCTCATGACAGATGGGTGGGAAAATAGTTCTTCATTATGTTCATCTCCTACAGGAGTGTTGCATAAGACCGCGTTTGGATCAGTTTCCAATAGCAACTCAGGGAGCAGTCCGCAGGCTGAGAACAATAAAGGACTTGAAGGGGTCAGTTTGTGCAATGACCTGCTTGGTTCCACTCTCGGCAATTCCTCCTCTTTGCCCAACTTGTAA 1572 0.4739 MLLHQRNSLLRSNNTSPFSDSQMLTFSSPKSESQFTDKASPNAALPFSYHQLAAYSRNTGYGSGGMHGVLTATRGPFTPSQWMELEHQALIYKYITANMAVPSHLLIPIRKALDSAGFGTFSNGLLRPTTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSPATTTNTNASKLIPNASSSAASVVVPGDAASNTLSFTHHHHHHHHQSKNLQPLSSHTSAPTNIDRMFMNNKDNASERVQDGSALPMLPPTLDLKPKENPFMMQKEQISYEESSRNEFGLVTSDSLLNPSHKGFGSSQNPSYRDAESQQSLRHFMDDWPKLDMQSDRTQLSISIPMAPSNFMSSTSSPTNEKVTLSPLRLSRELDPIQMGLGVGIGLNESSNRQANWIPIAWENSMGGPLGEVLHLSNNTSDCSKNSSLNLMTDGWENSSSLCSSPTGVLHKTAFGSVSNSNSGSSPQAENNKGLEGVSLCNDLLGSTLGNSSSLPNL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1751 523 MobiDBLite consensus disorder prediction 193 208 - -
Mibi08g1751 523 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi08g1751 523 ProSiteProfiles WRC domain profile. 145 189 IPR014977 -
Mibi08g1751 523 MobiDBLite consensus disorder prediction 229 292 - -
Mibi08g1751 523 Pfam QLQ 76 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi08g1751 523 MobiDBLite consensus disorder prediction 246 273 - -
Mibi08g1751 523 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi08g1751 523 Pfam WRC 146 188 IPR014977 -
Mibi08g1751 523 PANTHER GROWTH-REGULATING FACTOR 5 22 375 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi08g1751 523 MobiDBLite consensus disorder prediction 13 39 - -
Mibi08g1751 523 MobiDBLite consensus disorder prediction 172 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1751 Mibi-ChrMibi08 34201509 34204284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1751 3 481 GRF Transcription Factor Family AT2G22840 43.359 1.74e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi08g1751 WRC 4.7e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1751 08 34201509 34204284 Mibi08g1751 08 34201509 34204284 ECH