Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1731 ATGGCGTCGAAGAGTGCTTGGTGCACATTGAGAATTGGTTTTGTTTCATCGTTCGTGGGAGAAGGATCCAAACTCCACCGATTGTTTTTCAAGATGTTGTGTGCTTGTTCAGGGGAGCAATTCAAATTCGAAGAGCCGCCAAATTCGCCGGAGTCCCTCGCTACAAGGGACTTCTCGGTTAGCGGACTCTCTTCGAGGACTGGGGAATGGGATTCTAAATTTGATGACACGCAAGTAGATGAAGCTGAATCTACTCTTAAAGAAGCTATCTCATTGAATTACGAGGAAGCTAGGGCTTTGTTGGGGAGGCTTGAATTCCAAAGAGGGAATTCCGATGCTGCACTTCAAGTATTTCAGGGGATTGACATCAAGGGTTTGACTCCAAGGATGATTAGGGCCATTTCTGAGAGAACCAAGCCAAGAAAACCACGTTCTAAGGCCGATCACGTTCTTCCCTATATAATGTCAAGGCATTCAGTAAGCCTGCTTCTTGAGGCCATTCTGCTTAAAGCTAAATCTTTGGAGGCACTCGGTCGTTACACTGAGGCTGCAAAAGAATGCAAAATTGTTCTGGACATGGTTGATTCTGCACTACCAGCTGGAATGCCTCAAGGTTTTGGCGAAGACTGTAAACTGCTAGATATGTTCCACCAAGCACTGGAGTTGCTTCCAAAACTTTGGACCAATGCGGGCTTACTAGATGAAGCTGTCACTGCATATCGGCGGGCTCTGATCAAGCCGTGGAATCTGGAGCCACAAATGCTGGCCTCCATGCAGAGAGATTTAGCTCTCACACTACTTTATGGTGGTGTTGAAACAGTCATTCCAGCTCATTTGCATGTGTGGGGTGAAACAACGCCGAAGACTAACATTGAAGAGGCTGTACTGTTGTTTCTCATACTCATGAAAAAGATAGCACTTCGGGAAATTGATTGGGATTATGAAATATTAGATCATCTTTCATTCGCACTTTCAATTACTGGGATGTTTGAATCATTGGCAGATCACGTTGAGCAGATCCTTCCAGGTGTTTATAGTCGTGCTGAGAGGTGGTACTTTCTTGCCCTTTGTTATAGTGCTGCAGGACAGAATGAAACAGCACTGAACCTTCTGATGAAAGTTTGTGGTAATTCTGAAGCAAAGTATACGCCCCATTTCCTATCCTTTTTATTGGGAGCAAAACTGTGTTCCCAAGATCCCAACCATGCTCATGAAGGCATTAGATTATCACGGAAAGTGATTGATCTAGCCAAGCATCACTGTGAGCACTTTCAGGGTCAAGGTCACAGATTTCTTGGTGTATGCTATGGGGCTGCGGCTAGAATTTCTATACTGGATTCTGAAAGAGTTATTTGTCAAAGAGAGTCTTTGAAATCCTTAAACCAAGCTGCCGTAATGGGAAATTGGGACCCTGAAGCGATATTCAGCCTTGGATTGGAAAATGCAGTTCAAAGAAATCTGGTGGCAGCTTCTGAGAACGCAGTGATGTACTCAGATATGGTTGTTGGTAGCTCTATAAAAGGTTGGCAACTGTTAGCACTCATAGTATCTGCCCAGCACCGATTCAAGGATGCTGAGACTGTAGTTGATTTTGCTTTAGATGAATCTGGAAGGACAGATCAGTTACAACTTTTAAGATTGAAAGCTGTGCTTCAAATTGCTCGGCAGCAACCTAAGCAAGCAATTGAGACTTACAGAATCTTGCTGGCGCTGATTCAAGCGCGAAAGGATTTCTGGCTTGAATATGAGAACATCAATCCAGCGAACACGTTGCTTGAATTAACAGAAAAAAAATTGGAAATGGAAGCCTGGCAGGATTTGGCAACCATTTATGCCGATCTAGGTGCCTTGATTGATGCAAAAACTTGTGTAGACAAAGCCCAGTTGATAGAATTCTTTTCTCCCAGAAGTTGGCATATTACCGGGAAATTATTTGAAGCTAAATCGTTATTCAAAGAGGCAATTGTTTCCTTCACAATCGCATTGTCAATAGAACCAGATTATGTTCCCAGCATCATTTCAAGTGCAGAACTGTTGTTGAAAGGTGGTATGCAATCACTTCCAATCGCAAGAAGCTTTTTAATGAACGCTTTGCGTTTGGAACCCACAAACCATGATGCTTGGTTCAAGCTTGGACTGATTTCAAAAAGGGAAGGTTCATTGCAGCAAGCAGCTGATTTCTTCCAAGCTGCATATGAGCTAAAGCTTACAGCTCCAGTTGAAAGATTTGTGGGAGTAATTGAGACTTCGAGATGA 2256 0.4335 MASKSAWCTLRIGFVSSFVGEGSKLHRLFFKMLCACSGEQFKFEEPPNSPESLATRDFSVSGLSSRTGEWDSKFDDTQVDEAESTLKEAISLNYEEARALLGRLEFQRGNSDAALQVFQGIDIKGLTPRMIRAISERTKPRKPRSKADHVLPYIMSRHSVSLLLEAILLKAKSLEALGRYTEAAKECKIVLDMVDSALPAGMPQGFGEDCKLLDMFHQALELLPKLWTNAGLLDEAVTAYRRALIKPWNLEPQMLASMQRDLALTLLYGGVETVIPAHLHVWGETTPKTNIEEAVLLFLILMKKIALREIDWDYEILDHLSFALSITGMFESLADHVEQILPGVYSRAERWYFLALCYSAAGQNETALNLLMKVCGNSEAKYTPHFLSFLLGAKLCSQDPNHAHEGIRLSRKVIDLAKHHCEHFQGQGHRFLGVCYGAAARISILDSERVICQRESLKSLNQAAVMGNWDPEAIFSLGLENAVQRNLVAASENAVMYSDMVVGSSIKGWQLLALIVSAQHRFKDAETVVDFALDESGRTDQLQLLRLKAVLQIARQQPKQAIETYRILLALIQARKDFWLEYENINPANTLLELTEKKLEMEAWQDLATIYADLGALIDAKTCVDKAQLIEFFSPRSWHITGKLFEAKSLFKEAIVSFTIALSIEPDYVPSIISSAELLLKGGMQSLPIARSFLMNALRLEPTNHDAWFKLGLISKREGSLQQAADFFQAAYELKLTAPVERFVGVIETSR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1731 751 Gene3D Tetratricopeptide repeat domain 288 571 IPR011990 GO:0005515
Mibi08g1731 751 Gene3D Tetratricopeptide repeat domain 65 272 IPR011990 GO:0005515
Mibi08g1731 751 PANTHER PROTEIN NPG1 32 743 IPR043376 -
Mibi08g1731 751 SUPERFAMILY TPR-like 508 735 IPR011990 GO:0005515
Mibi08g1731 751 ProSiteProfiles TPR repeat profile. 705 738 IPR019734 GO:0005515
Mibi08g1731 751 ProSiteProfiles TPR repeat profile. 635 668 IPR019734 GO:0005515
Mibi08g1731 751 SUPERFAMILY TPR-like 341 583 IPR011990 GO:0005515
Mibi08g1731 751 SMART tpr_5 635 668 IPR019734 GO:0005515
Mibi08g1731 751 SMART tpr_5 542 575 IPR019734 GO:0005515
Mibi08g1731 751 SMART tpr_5 164 197 IPR019734 GO:0005515
Mibi08g1731 751 SMART tpr_5 705 738 IPR019734 GO:0005515
Mibi08g1731 751 SMART tpr_5 348 381 IPR019734 GO:0005515
Mibi08g1731 751 SMART tpr_5 601 634 IPR019734 GO:0005515
Mibi08g1731 751 Pfam Tetratricopeptide repeat 706 735 IPR019734 GO:0005515
Mibi08g1731 751 Gene3D Tetratricopeptide repeat domain 683 740 IPR011990 GO:0005515
Mibi08g1731 751 Gene3D Tetratricopeptide repeat domain 581 682 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1731 Mibi-ChrMibi08 34039427 34042766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1731 32 744 Calmodulin-binding Proteins AT1G27460 58.996 0.0 849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1731 08 34039427 34042766 Mibi08g1731 08 34039427 34042766 ECH