Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1718 ATGTTAGAGTCTGCCATTATGCATGAGGTTTTCACTGGGGGACAGTATATTCTGCGGGAGTTCGAGCAAAAAGGGAGAGCTTGTGAGGCTGAGGAGACAATAAGCGATCTCCACGGTCTATTTGTCATTTGCCTGGTATTGGCCCCACAGTGGACTCTTATGTTCCGTTACAGAGAACTAGGACCTACCCAACCACTTGGAGTCATTCCTGATGGGGAAATGAGTTGCTTTAGAGGAATGTTTGCTTCAGAAGAGCATGACTACTCAACTCAATTTCTTGGCCAAAGCTCACTTCTGCTCGGGGAACACAACCGAATGCTCGTAGGATTAGAATCTACATTTTGCTCTGCTCCTGAAGCTGGGGAAAGTGAGTGCATGTTTAATTCTTTAGATGCGCTCAACCCATATTTGCAGTTTATTTCTCACGAAAGTAGTTTCAGTAGTCACTGCAGTGGTGACGCTTTCTTCGGTGCCGACTCGGGTCATATAAACTACAATCTCCGTGATCCTAGTCTGGCACTAGCAAATGATGCCTGCATGTTCATGAATGGTTGCATGATGCATGAGAAAGACACTGGCACTTTCATCCCATCACCAGTAAACAATTTGTTGGAAGAAACTGTTAGCTTTAATGAAGGCAGGAGAGGGGACAAACTGGAGAATTCTAACCAAAGTCAAGCTGAGTTCACAGCTTTTGCTGCCGAACAGATGTTACTGAAAAGGAAGTTTGATGTGCCAGAACTGGAGGCTTCAGCAGAAGATAAAATAAACATAAACTTATCGGAGAACCAGAAGAAGAAACCTCGTATTTCAAAAAATGCTCAAAAGAGTAAGGAGAATGCACAGTTAAAGAAGAACCAAAAGGTTGCTGCAGGAAATGGCTATAGGCCAGAAGAGACTGATACTGGATTACATGGACAGAGCTCTGATAGTTACAGCTTAGAGGACGATACTGCTTCTCAGGAAAATAGTGGAGAACCTTCCTCAGAGTCTAAATCACTAGTGACTCACAACACAAATGGGAAGACCAGGGCTAGTAGGGGATCAGCAACAGATCCCCAGAGCCTTTATGCCAGGAAAAGAAGAGAGAGAATAAATGAACGACTGAGAATCCTACAGAATCTTGTTCCAAATGGAACAAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTCCATTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTAAGTTCTGATGACATGTGGATGTACGCTCCAATTGCTTATAATGGAGTTGACATTGGATTGAATCTCAGCCGCAATATGTCTCCACCGACATGA 1308 0.4327 MLESAIMHEVFTGGQYILREFEQKGRACEAEETISDLHGLFVICLVLAPQWTLMFRYRELGPTQPLGVIPDGEMSCFRGMFASEEHDYSTQFLGQSSLLLGEHNRMLVGLESTFCSAPEAGESECMFNSLDALNPYLQFISHESSFSSHCSGDAFFGADSGHINYNLRDPSLALANDACMFMNGCMMHEKDTGTFIPSPVNNLLEETVSFNEGRRGDKLENSNQSQAEFTAFAAEQMLLKRKFDVPELEASAEDKININLSENQKKKPRISKNAQKSKENAQLKKNQKVAAGNGYRPEETDTGLHGQSSDSYSLEDDTASQENSGEPSSESKSLVTHNTNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMYAPIAYNGVDIGLNLSRNMSPPT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1718 435 MobiDBLite consensus disorder prediction 302 353 - -
Mibi08g1718 435 MobiDBLite consensus disorder prediction 259 360 - -
Mibi08g1718 435 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 349 398 IPR011598 GO:0046983
Mibi08g1718 435 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 189 421 - -
Mibi08g1718 435 CDD bHLH_AtIND_like 350 412 - -
Mibi08g1718 435 Gene3D - 351 407 IPR036638 GO:0046983
Mibi08g1718 435 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 349 415 IPR036638 GO:0046983
Mibi08g1718 435 SMART finulus 355 404 IPR011598 GO:0046983
Mibi08g1718 435 FunFam Basic helix-loop-helix transcription factor 350 407 - -
Mibi08g1718 435 Pfam Helix-loop-helix DNA-binding domain 359 399 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1718 Mibi-ChrMibi08 33903447 33906045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1718 235 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 53.171 6.72e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g1718 HLH 2.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1718 08 33903447 33906045 Mibi08g1718 08 33903447 33906045 ECH