Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1691 ATGGCTGTGGAGCTTATATCTGGTCATGGGGATGACAGTTTTGCAGGCAGGACGGAAGTAGACAACACAATCGCTGTTCAGGAAGCTACGGCTGCTGGCATTCACAGCGTCGAGAAGCTCATGACAATCATTTCTCACCACCGAGAAGATGATGAGGCTTCTGCTTCCCAAGGACATCCTTCAGAACTGGAAATCCTAGCAGATACAGCCATGAACAAGTTCAAAAGGGTCATTTCTCTTTTGGACAGGCCACGAGTTGGCCACGCTCGTTTCAGAAAAGCTCCTCCCACACAGGCTTCGATCCCAATACCTTCCTTTACAGAACGGCAACAGAACAAAACAGAGCAACCCTCTGCTTTTAAGGTTTATTGTCCTACACCGGTTTTGCGTCTTCCACCACTGCCTCACCAGGCGAACCAATCTTCTTCCTCGTTTCATCGGTTGGAAAAGAAGGAGGCGAATGGTGGGGTCCAGTTTTCGGCATCGCCGCCTGCTTCCGCCGCCAATTCGTACATGTCGGCGTTAACAGGGGATACTGATAGTATGCAAAGATCTTGTCACTCTTCTGGGTTCCAAATCATTCACAACCATAGATCACAGCAGCAGGGATCTTACATGGGGAAGCCGCCATTGTGTTCTAGTTCTTTAAAGAGGAAGTGTACTTCAATGGATGATGCCAATCTCAAGTGTGGATCATCTTCTGGTCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGACAAGGAGAGTGGTCAGAGTACCAGCAATCAGCTCCAAGATGGCTGATATTCCAGCTGATGAATACTCATGGAGAAAATATGGACAAAAGCCCATCAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGCAGTGTGAGAGGGTGCCCAGCACGAAAACATGTGGAGCGTGCTCTAGACGATCCCACTATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCGCTGGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCCTAG 1008 0.4901 MAVELISGHGDDSFAGRTEVDNTIAVQEATAAGIHSVEKLMTIISHHREDDEASASQGHPSELEILADTAMNKFKRVISLLDRPRVGHARFRKAPPTQASIPIPSFTERQQNKTEQPSAFKVYCPTPVLRLPPLPHQANQSSSSFHRLEKKEANGGVQFSASPPASAANSYMSALTGDTDSMQRSCHSSGFQIIHNHRSQQQGSYMGKPPLCSSSLKRKCTSMDDANLKCGSSSGRCHCSKKRKSKTRRVVRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEADHNHSLEVAAAVVLESS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1691 335 MobiDBLite consensus disorder prediction 100 116 - -
Mibi08g1691 335 FunFam WRKY transcription factor 65 248 325 - -
Mibi08g1691 335 Pfam Plant zinc cluster domain 217 262 IPR018872 -
Mibi08g1691 335 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 325 IPR044810 GO:0003700
Mibi08g1691 335 Gene3D WRKY domain 246 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1691 335 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1691 335 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1691 335 MobiDBLite consensus disorder prediction 93 116 - -
Mibi08g1691 335 SUPERFAMILY WRKY DNA-binding domain 262 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1691 335 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1691 Mibi-ChrMibi08 33595028 33596280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1691 13 285 WRKY Transcription Factor Family AT4G24240 46.382 5.18e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g1691 WRKY 3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1691 08 33595028 33596280 Mibi08g1691 08 33595028 33596280 ECH