Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1685 ATGGAAGAAAGGGACTGTTGTTCACGGGATGGTTCAACGATCACCACCACGACGAGGAGCAGAAGCAGCAGCAGCAGCAGCGCAGGAGAGAAGAGGAAGCAGCAGCAGAAAACAACAACAACGAAGGAGAATAATAAGCCATACAGAGGGATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCTGAGATCAGAGAACCAAACAAGAGGTCAAGGATTTGGCTTGGTTCTTACACCACCCCTATCGCCGCCGCACGCGCCTACGACACCGCCGTCTATTACCTCCGGGGACCCTCCGCCTCCCTCAACTTCCCCGAACAACTGTTCCAAGACGGCGGCTCTCTCAGCCGTGCCGCAGCAGACTTGTCCGCCGATTCCATACGCAAGAAGGCCACCGAAGTCGGCGCCAGAGTTGATGCCCTCCAAACAGCCCTTAACGCTTCCTCTTCCTCATCTCCCTCCACTAGTTCCACCCAAACCACATCCCAAAAACCAGACTTGAATGAGTACCCTCAACCTGAAGAAGACTACTCCATCGAGGATTAA 543 0.5433 MEERDCCSRDGSTITTTTRSRSSSSSSAGEKRKQQQKTTTTKENNKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVYYLRGPSASLNFPEQLFQDGGSLSRAAADLSADSIRKKATEVGARVDALQTALNASSSSSPSTSSTQTTSQKPDLNEYPQPEEDYSIED 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1685 180 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 MobiDBLite consensus disorder prediction 143 180 - -
Mibi08g1685 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 26 175 - -
Mibi08g1685 180 PRINTS Ethylene responsive element binding protein signature 86 106 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 FunFam Ethylene-responsive transcription factor 2 46 105 - -
Mibi08g1685 180 Pfam AP2 domain 48 96 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 MobiDBLite consensus disorder prediction 10 46 - -
Mibi08g1685 180 MobiDBLite consensus disorder prediction 143 167 - -
Mibi08g1685 180 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Mibi08g1685 180 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Mibi08g1685 180 MobiDBLite consensus disorder prediction 1 48 - -
Mibi08g1685 180 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1685 Mibi-ChrMibi08 33495759 33496301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1685 31 155 AP2-EREBP Transcription Factor Family AT1G46768 63.566 1.23e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g1685 AP2 2.1e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1685 08 33495759 33496301 Mibi08g1685 08 33495759 33496301 ECH