Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1680 | ATGCAGGCATTGGCTACAGCCCTCGCAAATGCTCCACCTGAACAGCAGAGGACCATGCTTGGTGAAGCTTTATACCATCTAGTAGAACGGCTGGAGCATGATGTGGCAGCTAAGGTAATGGGTATGATTTTGGAGATGGACCAACCTGAGGTATTGCATCTTATTGAATCACCTGAAGCTCTCAAGGCTAAAGTTGCTGAGGCCATGGAGGTTTTAAGAAATGTGGCACAGCAAGCTCGCAGCCTAACCAGCCAACTGGCCTCGCTGTCTCTTAATGACAACCTATTTTCTTAA | 294 | 0.4762 | MQALATALANAPPEQQRTMLGEALYHLVERLEHDVAAKVMGMILEMDQPEVLHLIESPEALKAKVAEAMEVLRNVAQQARSLTSQLASLSLNDNLFS | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1680 | 97 | FunFam | Polyadenylate-binding protein | 1 | 78 | - | - | |
| Mibi08g1680 | 97 | ProSiteProfiles | Poly(A)-binding protein C-terminal (PABC) domain profile. | 1 | 77 | IPR002004 | GO:0003723 | |
| Mibi08g1680 | 97 | Coils | Coil | 72 | 92 | - | - | |
| Mibi08g1680 | 97 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | 11 | 88 | - | - | |
| Mibi08g1680 | 97 | SMART | poly_2 | 12 | 75 | IPR002004 | GO:0003723 | |
| Mibi08g1680 | 97 | SUPERFAMILY | PABC (PABP) domain | 3 | 84 | IPR036053 | GO:0003723 | |
| Mibi08g1680 | 97 | Gene3D | - | 1 | 79 | - | - | |
| Mibi08g1680 | 97 | Pfam | Poly-adenylate binding protein, unique domain | 8 | 72 | IPR002004 | GO:0003723 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1680 | Mibi-ChrMibi08 | 33404806 | 33405215 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1680 | 3 | 95 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 75.532 | 2.42e-37 | 130 |