Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1669 ATGGCGGATATGTACGGAACTCCTCCTTCTCTGCTCACAGCCTCCGCCGCCATGCCTTCTGATTCCGACGATTTCTCCGCCTTCTTCACCCACCTTCTCCGTAACTCACCTTCCTCTTCCATCCTCTCTAAACCTAAAACCTCGCCGCCTCCTCCGTGGGTCCCACCGCCGGTGGGGACCGCCGTGTTCGGCCGATTAGGTTCCGATTCGCCTCACAGAAATGGCAAGTCCGATGCGGTTTCTGATTCTTTCGAATTTTCCGATCCCTATGGATATGTTCCGCCTGATGTGAAAGAAGCTCCTGGAAATGGAAATGAGTTGTTTCCGACTGGAATTGATGATTCTGATGAGAATATTTCCTTCAAAGAACATAGGATTTCGCCGGAGATTGATCCCCCCGGCGATTTCATTTTTGATGTCGAGAAGAATGGTGAGTCGTCGCAGACAAAACGAGTCCCAGCACGTACTTCCTCAAAGAGAAGCAGAGCTGCAGAAGTTCATAATATGTCTGAAAAGAGAAGGAGGAGTAGGATTAACGAGAAAATGAAGGCCTTGCAGAACTTAATTCCAAATTCTAACAAGACGGATAAAGCTTCAATGCTGGACGAGGCGATTGAATATTTGAAGCAACTTCAGTTTCAAGTGCAAATGTTAATGATGAGGAATGGTTTGAGCTTGCATCCAATGTGTTTACCAGGATCTATGACACTGCCTCAGACAGAATTTAATTTTGACGAGTCCAATGTATATCACAATTCTTCTCGCGGAATTGCCTCATCATCGTCCCTCAACAATGCTGAATGCTTAGTGCCCCCACCGGATTTTAGTCTTCCAAAGTATTGCAACATCTCAGATCAACCTCCTATGATCATCCCCTCCATTACAAACATGTCCAATAACCCTGATACCTCTACTGGTTTTAGATTTCACGTTACACAATTTGACCCTTCTACGTCATCCAAGGATGCACTCTCTAATGGCGCACCACAGCTCCACTTGGATGCCGCAAAGATTGAAAAGAGTGCGTCTTCGGATGTCTCCTAG 1044 0.4636 MADMYGTPPSLLTASAAMPSDSDDFSAFFTHLLRNSPSSSILSKPKTSPPPPWVPPPVGTAVFGRLGSDSPHRNGKSDAVSDSFEFSDPYGYVPPDVKEAPGNGNELFPTGIDDSDENISFKEHRISPEIDPPGDFIFDVEKNGESSQTKRVPARTSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQFQVQMLMMRNGLSLHPMCLPGSMTLPQTEFNFDESNVYHNSSRGIASSSSLNNAECLVPPPDFSLPKYCNISDQPPMIIPSITNMSNNPDTSTGFRFHVTQFDPSTSSKDALSNGAPQLHLDAAKIEKSASSDVS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1669 347 MobiDBLite consensus disorder prediction 38 117 - -
Mibi08g1669 347 Gene3D - 157 221 IPR036638 GO:0046983
Mibi08g1669 347 MobiDBLite consensus disorder prediction 44 58 - -
Mibi08g1669 347 MobiDBLite consensus disorder prediction 143 176 - -
Mibi08g1669 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 222 IPR036638 GO:0046983
Mibi08g1669 347 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 21 309 IPR031066 -
Mibi08g1669 347 MobiDBLite consensus disorder prediction 158 176 - -
Mibi08g1669 347 FunFam Basic helix-loop-helix transcription factor 157 220 - -
Mibi08g1669 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Mibi08g1669 347 SMART finulus 168 217 IPR011598 GO:0046983
Mibi08g1669 347 Coils Coil 168 188 - -
Mibi08g1669 347 CDD bHLH_AtPIF_like 162 224 - -
Mibi08g1669 347 Pfam Helix-loop-helix DNA-binding domain 166 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1669 Mibi-ChrMibi08 33272957 33275281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1669 162 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 85.714 7.91e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g1669 HLH 1.7e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1669 08 33272957 33275281 Mibi08g1669 08 33272957 33275281 ECH