Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1668 ATGACGAGCTATGCGTTTCTGAACGATCAGCTCTCAAAGCATACCTCAATCTTCGGGTTACGATTGTGGGTTGTGCTGGGCATATGCGTCGGAGCAGCCATTGTCATTTTACTGTTTATCATATCGCTTTGGTTCGCTGCAAAACGCAATAATGCTTCCAAGCTCAAGTCTTGTCAAAAACCCAACATCAACAACATACCAAATGTGTCCAAGGAGATTCAGGAAATCCGTATCGACCATTCTCGTGAACCCACTAAGCAAAACCTTGTGCCAAACCCTGACCCATCACAGGAATCACAGTCCGAAGCTCTAGAAAGAGCACAGGCCATTCTTCTTCAGCAAGAAGACGAAAGCCCAGCAACAGGGCCCCACAAAATTCACATTGAAATTGGAAAGGGTCACAGGATTTCGTACCCTGAGAGGGGTGGAGGTGGTTCTTCGCATGGAAGTGGGGAGGTTCGGTCTGGTGAGCAATCCTCCATTGCTGTGCCGGAAGTTTCTCATTTGGGTTGGGGGCATTGGTACACTCTTCGAGAGCTTGAGGTTTCCACCAATTTTTTCGCTGATGAGAATGTCATAGGTGAAGGTGGCTATGGAATTGTTTATCGAGGGGTTTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAACAATAAGGGTCAAGCTGAGAGGGAATTCAGGGTGGAAGTTCAAGCAATCGGGCGTGTTCGACACAAAAATTTGGTGAGGTTGCTTGGATATTGCGTTGAAGGAGCTCATAGGATGCTTGTTTATGAGTATGTGGATAATGGAAATCTAGAACAGTGGCTACATGGAGATTCCAGCCCTTCTAGCCCCCTGACGTGGGATATCCGAATGAATATAATACTTGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCGAAGGTTGTTCATCGTGATATCAAGTCGAGCAATATATTGCTTGATAAGCGATGGAATCCGAAGGTTTCTGATTTTGGGCTTGCAAAACTTTTGGGATCCGAAAGGAGTTATGTGACAACTCGCGTTATGGGAACATTTGGATATGTGGCGCCAGAATATGCAAGCACTGGCATGTTGAACGAAAGAAGCGATGTGTATAGCTTTGGGGTTCTTCTTATGGAGATAATTTCTGGCAGAAACCCAGTTGATTATAGCCGTCCTCCAGGAGAGGTGAACCTGGTTGAGTGGCTGAAGACAATGGTTACAAATCGAAATGCAGAAGGTGTGCTGGATCCTAGGCTACCTGAGAAACCTTCGTCTAGAGCACTGAAGCGTGCCTTATTAGTAGCTTTACGGTGTGTAGATCCAAATGTCCAGAAAAGGCCAAAGATGGGACATGTTATACATATGCTCGAAGCTGAGGAGTTCCCATTCCGAGAGGACCGTAGAGCTGGAAGGGAATATGGACGGTCTCATCAGGATAACACAAGAGATAAGTTGATGGAAAAGCGAGTAACCGAATCCGCTGACAGTAGTGCGTATGAAAGTAGTTCCCACACTACATAG 1527 0.4578 MTSYAFLNDQLSKHTSIFGLRLWVVLGICVGAAIVILLFIISLWFAAKRNNASKLKSCQKPNINNIPNVSKEIQEIRIDHSREPTKQNLVPNPDPSQESQSEALERAQAILLQQEDESPATGPHKIHIEIGKGHRISYPERGGGGSSHGSGEVRSGEQSSIAVPEVSHLGWGHWYTLRELEVSTNFFADENVIGEGGYGIVYRGVLQDNTNVAVKNLLNNKGQAEREFRVEVQAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHGDSSPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEAEEFPFREDRRAGREYGRSHQDNTRDKLMEKRVTESADSSAYESSSHTT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1668 508 SMART serkin_6 187 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1668 508 Pfam Protein kinase domain 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1668 508 ProSiteProfiles Protein kinase domain profile. 187 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1668 508 MobiDBLite consensus disorder prediction 81 103 - -
Mibi08g1668 508 MobiDBLite consensus disorder prediction 468 508 - -
Mibi08g1668 508 CDD STKc_IRAK 193 459 - -
Mibi08g1668 508 Gene3D Phosphorylase Kinase; domain 1 153 262 - -
Mibi08g1668 508 SUPERFAMILY Protein kinase-like (PK-like) 171 459 IPR011009 -
Mibi08g1668 508 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Mibi08g1668 508 PANTHER OS01G0323000 PROTEIN 1 491 - -
Mibi08g1668 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Mibi08g1668 508 FunFam Putative receptor-like serine/threonine-protein kinase 263 473 - -
Mibi08g1668 508 MobiDBLite consensus disorder prediction 135 161 - -
Mibi08g1668 508 MobiDBLite consensus disorder prediction 468 496 - -
Mibi08g1668 508 FunFam Probable serine/threonine-protein kinase At1g01540 167 262 - -
Mibi08g1668 508 MobiDBLite consensus disorder prediction 85 103 - -
Mibi08g1668 508 Gene3D Transferase(Phosphotransferase) domain 1 263 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1668 Mibi-ChrMibi08 33266980 33269354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1668 145 461 Trihelix Transcription Factor Family AT1G70460 46.584 1.96e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi08g1668 Pkinase 3.7e-47 CL0016