Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1663 ATGGACACAATGATGGCGATGATGACGCAAATCCCCGAATTCTCTGGAACCTACAGCAACAACGACGTCGTTTCATATGACTTCGCACTGCCTGACCTCTCTCCCGCCGGCAACAAACACGAAATAACGTCACATTTTCTGGACAAATCTCCGGTGGTGACGTCATCGTCGCCATCCTCATTCACAAACTCACAATCAGCCACAATTTCCTTTTCTACCCCTTCTCCGACGGCGCCTTACGGCGGAAGATCATCGGAAAAGGGGATTTCAATGGAGGCGATGAGAGAGATGATATTCAGAATTGCGGTGATGCAGCCGATTCATATAGATCCGGAATCGGTGAAGCCGCCGAAAAGGAGGAACGTGAGGATTTCGAAGGATCCACAGAGCGTGGCGGCGCGTCACAGGAGAGAGAGGATTAGTGAGAGAATGAGGATTTTGCAGAGATTGGTTCCAGGAGGGACGAAAATGGACACGGCTTCCATGTTAGATGAAGCGATTCATTATGTGAAGTTTCTCAAGGCTCAGGTTCAGTCACTTGAAACTGCTTCTTCTGCTAATAAGTCTCATGGGTTTGGATTCCCTGTGGCCAATTCTTCTTCTACCTCATATCTTCATCTCCCATCAAGACCTTACCATTTTTCTCCTCCAAATGTTCCGCGTTTTGGACATGATGTTTAA 681 0.4772 MDTMMAMMTQIPEFSGTYSNNDVVSYDFALPDLSPAGNKHEITSHFLDKSPVVTSSSPSSFTNSQSATISFSTPSPTAPYGGRSSEKGISMEAMREMIFRIAVMQPIHIDPESVKPPKRRNVRISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKAQVQSLETASSANKSHGFGFPVANSSSTSYLHLPSRPYHFSPPNVPRFGHDV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1663 226 FunFam BHLH transcription factor 127 191 - -
Mibi08g1663 226 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 45 211 IPR045843 GO:0003700|GO:0006355
Mibi08g1663 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 183 IPR036638 GO:0046983
Mibi08g1663 226 CDD bHLH_AtIND_like 125 182 - -
Mibi08g1663 226 SMART finulus 130 179 IPR011598 GO:0046983
Mibi08g1663 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Mibi08g1663 226 MobiDBLite consensus disorder prediction 55 85 - -
Mibi08g1663 226 Gene3D - 123 190 IPR036638 GO:0046983
Mibi08g1663 226 MobiDBLite consensus disorder prediction 55 80 - -
Mibi08g1663 226 Pfam Helix-loop-helix DNA-binding domain 133 173 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1663 Mibi-ChrMibi08 33207365 33208045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1663 73 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 79.130 2.07e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g1663 HLH 4.8e-06 No_clan